Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq738 217 1e-51 seq3311 107 2e-18 >seq738 Length=1970462 Score = 217 bits (240), Expect = 1e-51 Identities = 450/669 (67%), Gaps = 3/669 (0%) Strand=Plus/Minus Query 20153 CGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAAC 20212 |||| ||||||| |||||||| | || | ||| ||||| ||||||||||| Sbjct 1173159 CGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTAAATGTGTGCATCTCCCAAA 1173100 Query 20213 GTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGG 20272 ||||| | || || || || | || || || | || |||| ||| || || | || Sbjct 1173099 GTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGA 1173040 Query 20273 GAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGC 20332 || |||||||| ||||| || || || |||| ||||||||||| |||| || ||||||| Sbjct 1173039 GAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCTCCTGACCGCTCATACAGC 1172980 Query 20333 TGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGC 20392 || ||||| |||||||||| | || || || || || | || ||||| || || Sbjct 1172979 TGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAGGGCATGGCAGGGTGGGAGG 1172920 Query 20393 GCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGA 20452 ||| | | || | || || ||||| |||||||| ||||||||||| || | || Sbjct 1172919 GCCGTGAGCGGGAGGTGTTTTGGATTCCAGGCACACATGATGATTCTTCTGTCATTAGGG 1172860 Query 20453 TTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCA 20512 || |||| ||| || | | | || |||||| | || | ||||| ||| || Sbjct 1172859 TTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTACTCCTTTGCCTGAATAATCT 1172800 Query 20513 GCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCC 20572 | ||||| || |||| | |||||||| ||||||||||| || | ||| || || || Sbjct 1172799 GAATCCGTATCTTCGTATTCGGCCCCAAAATGCCTCCACTGAAAGCGGTATACTGGGCCT 1172740 Query 20573 AAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTT 20632 | ||| || || |||| | | || | | | ||| || | | ||| ||||| Sbjct 1172739 AGATCTCCTTC---TCTGGTGGAGAATCCCAGGCTGTCCAAGACGCCTCGGGACCCATTG 1172683 Query 20633 TTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGA 20692 |||||| || || ||||| | || |||||| | | || || ||||| | | Sbjct 1172682 GCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCCCTTGATA 1172623 Query 20693 AACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGA 20752 ||||| |||| || | || || || ||| || || || || || || || | ||| Sbjct 1172622 AACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACACGTTTGGTTGTGAGCAGTGGA 1172563 Query 20753 AAGTGGTCCCGCAGACTATACCTGGCCTGCATGCCAAATAGAGAGAGGGTGCCTATGCCG 20812 || | || | || || || | ||||||||||| || | || |||||||| |||| Sbjct 1172562 AATTCATCTCTGAGGCTGTAGCGCGCCTGCATGCCGAACACCGACAGGGTGCCGGTGCCC 1172503 Query 20813 GTGCGGTCG 20821 ||||||||| Sbjct 1172502 GTGCGGTCG 1172494 >seq3311 Length=707574 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || || | ||| || || | ||||| |||||||| ||||| || || || |||| ||| Sbjct 355798 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCC 355739 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 ||||||||||||| ||| |||||||| ||||| |||||||||| | || || || || Sbjct 355738 ATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 355679 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || | ||| |||||||| || ||||| Sbjct 355678 CAAAGGGCGTGGCAGGGCGGGAGGGCCAT 355650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441299234188560