Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq383 120 1e-21 seq1122 113 2e-19 >seq383 Length=851692 Score = 120 bits (132), Expect = 1e-21 Identities = 338/516 (66%), Gaps = 5/516 (1%) Strand=Plus/Minus Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| || | |||||| |||||| | |||||| | | | | ||||| | || ||| Sbjct 467327 AACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTGCAA 467268 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 ||| | ||| | | ||| | | ||| | ||| || ||| |||||| | | Sbjct 467267 TCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAATG 467208 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || || ||||| || | ||| |||| ||||| ||||| || |||||||| || Sbjct 467207 GTGTCCTACAAAGGGGAGAAAAAAGCTTTCTACCCTGAGGAAATCTCTTCTATGGTACTG 467148 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC-CAGTTACTGATGCAGTAAT 451329 ||||| ||||| || || || || | | |||| | | | || || |||| || || Sbjct 467147 ACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCCACACTGTCACCAATGCTGTGAT 467089 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 || || || || ||||||||||| | || || || || || || |||||||| || Sbjct 467088 CACCGTGCCAGCCTATTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCAGGTGTGAT 467029 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 ||| ||| | || || || ||||||| || ||||| ||||| ||||| | || ||||| Sbjct 467028 TGCAGGTCTCAACGTGCTAAGAATTATCAACGAACCCACAGCTGCTGCCATTGCTTATGG 466969 Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 ||| ||| | || | ||| | | | || | |||||| | |||||||| Sbjct 466968 CTTAGATAAAGC---AGGTCAGGGAGAGCGACACGTCCTAATCTTTGATCTGGGTGGAGG 466912 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 || |||| || | || | || || || ||| | ||||| || ||||| || Sbjct 466911 CACATTTGATGTGTCCATCCTGACCATAGATGACGGGATTTTTGAGGTGAAGGCCACGGC 466852 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || || || || || || |||| || Sbjct 466851 TGGGGACACGCACCTGGGTGGGGAGGACTTTGACAA 466816 >seq1122 Length=1361222 Score = 113 bits (124), Expect = 2e-19 Identities = 237/353 (67%), Gaps = 3/353 (1%) Strand=Plus/Plus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 || ||||| || || || || || |||| || ||| || || | ||||| ||||| Sbjct 1261727 CAGGTAAAATACAAGGGAGAGACAAAAAGCTTGTATCCAGAGGAGGTGTCATCCGTGGTT 1261786 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || || ||| | ||||| |||||| || |||| | ||||| |||| | Sbjct 1261787 TTGACAAAGATGGAGGAAACTGCAGAAGCCTACCTTGGGAAGACTGTTACCAATGCTGAT 1261846 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 | || || ||| ||||||||||||| | || | || || || |||||||| ||| | Sbjct 1261847 GTCACAGTACCCACTTATTTCAATGACTCTCAGCATCAGGCTACCAAAGATGCTGGAACT 1261906 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||||||| | || || ||| |||| |||||||| || || || |||||| | || || Sbjct 1261907 ATTGCTGGTCTCAAAGTACTTAGAATCATTAATGAGCCAACTGCTGCTGCTATTGCTAAT 1261966 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || ||| | ||| | || |||| |||| | | | ||||| || ||||| Sbjct 1261967 GGCTTAG---ACGAAAAGGTTGGAGCTGAAAGAAATGTGCTGATCTTTGACTTGGGTGGT 1262023 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 || ||| |||| || ||| | ||||| ||||| | ||||| || || Sbjct 1262024 GGCACTTTTGATGTGTCAACCCTTACTATTGAGGATGGAATCTTTGATGTCAA 1262076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975380864564072