Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1139 82.4 9e-11 >seq1139 Length=383792 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/245 (67%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||||||||||| ||||||| |||| || |||||| |||| || || | ||| Sbjct 194361 ATCATGATTACATACTCATCTACCAATGGAGTGTTTGAAGAGAACACTGGAGAGGTGTGT 194420 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | | || || | || || |||| || || || || |||||| | || || ||| Sbjct 194421 GACCTGATCCACAAGCACGGAGGGTAGGTCTACCTGGACGGGGCAAATATGAACGCTCAG 194480 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 || || | || |||| ||| | ||||| | || ||||| | || ||| Sbjct 194481 GTGGGAATCTGTTGTCCTGCAGACTTTGGGTCTGATGTCTCACACCTAAATCTTCACAAG 194540 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAA 159786 || ||||| ||||| |||||||| || || || ||| | || || ||||| || ||| Sbjct 194541 ACCTTCTGCATTCCCCATGGAGGAGGCGGCCCCGGCATGGGGCCCATTGGAGTGAAGAAA 194600 Query 159787 CATCT 159791 ||||| Sbjct 194601 CATCT 194605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587953186566240