Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq141 98.7 1e-15 seq87 95.1 2e-14 >seq141 Length=920444 Score = 98.7 bits (108), Expect = 1e-15 Identities = 127/175 (73%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 2255 GATCTGCGAGATCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAA 2314 || ||| |||||||| ||||| || ||||| ||| |||| ||||| ||| | ||| Sbjct 302922 GACCTGTGAGATCCACCTGACTTGCTCTGTGGAGAATCCAAATGATGTCATAT---TCAG 302866 Query 2315 ATGGGAGGCCTTGGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCC 2374 ||| || || || || || ||||| | || | |||||||| | |||||||||||| Sbjct 302865 GTGGCAGATCTCAGGAAAAACACTTCTGAGGGAAGCAAACCTCACTATCTCCTGGGACCC 302806 Query 2375 CAGGAACAGCAGTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAAT 2429 || || |||||| ||| |||||| ||||| || || || |||| |||||| Sbjct 302805 CAAAAATGACAGTGAAGAGACCTACACTTGCATAGCTGAGAATCCTGTCAGCAAT 302751 >seq87 Length=1222039 Score = 95.1 bits (104), Expect = 2e-14 Identities = 182/266 (68%), Gaps = 3/266 (1%) Strand=Plus/Minus Query 1878 GTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACA 1937 || || ||||||||||| ||||| | || |||||||||| || |||||||| |||| Sbjct 467889 GTTTCACAAACCAGCTCAACCCCACAAATTGTGAATGGGGCTCTGGGGGAGTCAGTAATG 467830 Query 1938 CTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGCACTACAACGGC 1997 || |||||| | ||| | || | ||| ||||| ||| |||| ||||| ||||||| Sbjct 467829 CTTCCCCTGAAGTTTTCTGCAGAGAAGAGGATCATGTCTATCATCTGGCTTCACAACGGA 467770 Query 1998 ACCTCCATCGCCTTTATTGCCCCCTCGGAGGCCAAGAGCCCCCAGATCCACCTAACCAAT 2057 | || |||||||| | | | | ||| ||| || | | || | |||| || Sbjct 467769 ATATCTATCGCCTTCA--CACAGTTAGAAGGACAA-AGTTCACTGACATATATAACTGAT 467713 Query 2058 CCGAAACTGGGCAAGCGACTCAACTTCACGCAGTCCTACTCCCTACAACTGAGCAACCTA 2117 || ||| | || ||| | | |||| | ||||||||| | ||| | |||||||| Sbjct 467712 CCAAAATGGAAAAATCGATTGAGTGTCACTGACTCCTACTCCTTGCAAATCAGCAACCTG 467653 Query 2118 GAGATGGAAGACACCGGGTCCTACAG 2143 |||| |||| | || || ||||| Sbjct 467652 ACAATGGCAGACGCAGGATCTTACAG 467627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629178314222640