Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq418 91.5 4e-14 >seq418 Length=964272 Score = 91.5 bits (100), Expect = 4e-14 Identities = 188/276 (68%), Gaps = 18/276 (7%) Strand=Plus/Minus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017 |||| | ||| | || || ||| ||||||| | || || || || || || | | Sbjct 659820 TTCCTTCTGGGTACTACGGGAGAGTAGCTCCACGTTCAGGCTTGGCTGCAAAACACTTCA 659761 Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077 | ||||| || |||||||| | ||| ||| | || || || ||||||||||| ||| Sbjct 659760 TAGATGTAGGAGCTGGTGTCACAGATGAAGATTATACAGGAAATGTTGGTGTTGTACTAT 659701 Query 1078 TTAATTTTAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAA 1134 |||||||| || || ||| ||| | | || |||||| | ||||| ||| | | Sbjct 659700 TTAATTTTGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATCGAATTGCACAGCTCA 659644 Query 1135 TTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGATT 1188 |||||||| | | ||||||| ||| |||||| ||| ||| ||||| || Sbjct 659643 TTTGTGAA----CAGATTTTCCACCCA--GAAATAGAGGAAGTTCAAGTGTTAGATGACA 659590 Query 1189 CGGAAAGGGGTTCTGCAGGATTTGGGTCTACCGGAA 1224 | |||||||| || | ||| ||||| || || |||| Sbjct 659589 CTGAAAGGGGCTCAGGAGGTTTTGGTTCCACTGGAA 659554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138659640982104