Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq83 125 6e-24 seq2140 123 2e-23 >seq83 Length=833179 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| ||| | || |||||||| || || ||||| Sbjct 394628 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAG 394569 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||||| ||||||||| | || | || ||| || || |||||| ||| | | | Sbjct 394568 ATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGGATCTTCCCCTTGACATTC 394509 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | |||||||||| ||||| || ||||||||||| || ||||| Sbjct 394508 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACG 394449 Query 35726 AATATCTGCATT 35737 || ||||||||| Sbjct 394448 AAGATCTGCATT 394437 >seq2140 Length=878742 Score = 123 bits (136), Expect = 2e-23 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | || || | || ||||||||||| || || || Sbjct 744629 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 744688 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || |||||| ||| |||||| ||||| | | Sbjct 744689 GATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 744748 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || |||||||| || ||||| Sbjct 744749 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCAC 744808 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 744809 GAAGATCTGCATTTTG 744824 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| || || || Sbjct 744173 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 744232 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || |||||| ||| |||||| ||||| | | Sbjct 744233 GATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 744292 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 744293 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 744352 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 744353 GAAGATCTGCAT 744364 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | || || | || ||||||||||| || || || Sbjct 744401 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAA 744460 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || ||||| ||| |||||| ||||| | Sbjct 744461 GATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 744520 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || || || |||| || ||||| Sbjct 744521 CTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 744580 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 744581 GAAGATCTGCAT 744592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450718463976720