Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq738 313 2e-80 seq3311 143 2e-29 >seq738 Length=1970462 Score = 313 bits (346), Expect = 2e-80 Identities = 485/689 (70%), Gaps = 8/689 (1%) Strand=Plus/Minus Query 27105 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 27164 |||||||| || || || | | ||||| | ||||| || || ||||| |||||| Sbjct 1173177 GGGAAAGGC-CTTGGTTCTCGCGGAAGCTGCATTTTCAGTGGCTCAGTGTGATTCAGGTA 1173119 Query 27165 GACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224 | ||| || ||||||| ||||| |||| || || || | || || |||| ||| || Sbjct 1173118 AATGTGTGCATCTCCCAAAGTGTGTACAAGGTCACCTGGCTTCAGGCCTGTGATGTGTGC 1173059 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 |||||||| ||||| |||||||||||||||||||| ||||| || || || |||||||| Sbjct 1173058 AATCATGTAGGTGAGCAGAGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTC 1172999 Query 27285 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATAT 27344 || |||| || || ||||| || || ||||| || | ||||| ||||| || | Sbjct 1172998 TCCTGACCGCTCATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAAG 1172939 Query 27345 GGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGAT 27404 ||| ||||| || || || ||| |||| | || ||| || |||||||| |||| ||| Sbjct 1172938 GGCATGGCAGGGTGGGAGGGCCGTGAGCGGGAGGTGTTTTGGATTCCAGGCACACATGAT 1172879 Query 27405 GATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCAC 27464 ||| | ||||| | |||||| | |||| ||| | || ||||| || || || Sbjct 1172878 GATTCTTCTGTCATTAGGGTTGGTTTTGATTGTGTCAGTCACCTTCTGCAGTTGGTCTAC 1172819 Query 27465 CCCCATCCCCGAGTAGTCT--ACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAT 27522 || | || || || ||| | || || | | ||| || || || ||||||||||| Sbjct 1172818 TCCTTTGCCTGAATAATCTGAATCCGTATCTTC--GTATTCGGCCCCAAAATGCCTCCAC 1172761 Query 27523 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 27582 || || | ||| || || || || |||| |||| ||| ||| ||| ||||| Sbjct 1172760 TGAAAGCGGTATACTGGGCCTAGATCTC---CTTCTCTGGTGGAGAATCCCAGGCTGTCC 1172704 Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642 || | | ||| ||| || |||||||||||||| || || ||||| || ||||| || Sbjct 1172703 AAGACGCCTCGGGACCCATTGGCGTCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTA 1172644 Query 27643 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702 | ||||||||| || ||| |||||||||| ||||||| || ||||||| || || Sbjct 1172643 GCGTTTGTGGATCCCTTGATAAACCACAGCAATTCCTCCAAAACACCCTTCCAGAAAACA 1172584 Query 27703 CTCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACCTGGCCTGAGAACCAAAC 27762 | ||||| ||||| || ||||| | | |||||| ||| | ||||| || ||| Sbjct 1172583 CGTTTGGTTGTGAGCAGTGGAAATTCATCTCTGAGGCTGTAGCGCGCCTGCATGCCGAAC 1172524 Query 27763 ACGGACAAGACTCCCGTGCCCGTCCTGTC 27791 || |||| | || |||||||| | ||| Sbjct 1172523 ACCGACAGGGTGCCGGTGCCCGTGCGGTC 1172495 >seq3311 Length=707574 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || ||||||||||||||||| ||||| Sbjct 355810 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 355751 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| ||||||| |||||| ||||| || || ||||| || | Sbjct 355750 ACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 355691 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | ||||||||| || || || |||||||| Sbjct 355690 ACGTAGAACTGGCAAAGGGCGTGGCAGGGCGGGAGGGCCATGAG 355647 Score = 118 bits (130), Expect = 8e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| || || || |||||||||||||| || ||||| ||||| || || || Sbjct 352580 CATATCTTTGTATTCGGCCCCAAAATGCCTCCATTGAAAGCCGTAAACCGGGCCTAGATC 352521 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||| ||||| ||| ||| ||| ||||||| ||||||| ||| || |||||||| Sbjct 352520 TCCTTCTTCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCGTC 352461 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| || || ||||| || ||||| || | ||||||||| || Sbjct 352460 CCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCC 352413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369447152077754