Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20ferus_20[refseq_20GCF_5F000311805.1_202013-07-30] 13,334 sequences; 2,009,194,609 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1884 98.7 1e-15 seq2047 86.0 7e-12 seq6179 84.2 2e-11 >seq1884 Length=2638154 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | |||||| ||||| || | || ||||| | |||| || | Sbjct 1844779 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGGCCAGGCATAAGACCTCTCTTCT 1844838 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||||||||| |||||||| || || || |||||||| || || ||||| ||||||| Sbjct 1844839 TCAGCCAAAATATAGCAGCAAAAGAGCCTGAGAAGAAAATTCCTTCCACAGCAGCAAAGG 1844898 Query 23651 CCAC 23654 |||| Sbjct 1844899 CCAC 1844902 >seq2047 Length=1654074 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 1269612 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 1269671 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 1269672 CGCCACCACGCC 1269683 >seq6179 Length=345634 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| | || |||||||||||| | |||||||||||| |||||||| | Sbjct 306632 CTCCTGGGCTCAAGCATTCCTTCTGCCTCAGCCTTCTGAGTAGCTGGGACTACAGGCACA 306573 Query 8465 AGCCACCACGCCAAGC--TAATTTTTGTATTTT 8495 | ||||||||| || |||||||| | |||| Sbjct 306572 TGTCACCACGCCTGGCTGTAATTTTTATTTTTT 306540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521401080987600