Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 7e-20
seq7 105 1e-17
>seq4
Length=88276631
Score = 113 bits (124), Expect = 7e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || || ||||||||||| || | ||| | || | | |
Sbjct 70238743 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGT 70238802
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | ||| ||||| ||||| || || || || || ||||| ||
Sbjct 70238803 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 70238862
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || |||||||| || ||||| |||| ||| | ||||| | ||| || |||
Sbjct 70238863 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAAT 70238922
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || ||||| || || ||||| ||||| | || | |||||||| ||
Sbjct 70238923 ATCCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGCAT 70238972
>seq7
Length=80974532
Score = 105 bits (116), Expect = 1e-17
Identities = 162/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| | ||| | ||||| || | ||||||||||| || | ||| | || | | |
Sbjct 43111434 ATGCAGCTCTTTGTGAAGACCCTGATGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGT 43111375
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || | | ||| | ||| ||||| ||||| ||||| || || |||||||| ||
Sbjct 43111374 GACACCACTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCTGACCAG 43111315
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || |||||||| || ||||| |||| ||| | ||||| | ||| || |||
Sbjct 43111314 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAAT 43111255
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
| ||| ||||| || || ||||| ||||| | || | |||||||| ||
Sbjct 43111254 A-TCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGCAT 43111206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755425139622400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |