Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 3e-28
seq7 118 9e-22
seq26 116 3e-21
seq5 116 3e-21
seq39 91.5 1e-13
seq15 87.8 2e-12
>seq4
Length=88276631
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || ||||| || || ||| || ||| ||
Sbjct 70238952 CACCAAGTGCAAGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTTCGGCCATCTTC 70238893
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || || | || ||||||||||| || || || |||||||||||||||
Sbjct 70238892 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 70238833
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||||| ||| || | ||| | |||||| || ||||||||| | ||| | |||||
Sbjct 70238832 GATTTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTT 70238773
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || || ||||| ||||||||
Sbjct 70238772 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 70238743
>seq7
Length=80974532
Score = 118 bits (130), Expect = 9e-22
Identities = 153/210 (73%), Gaps = 1/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| ||| | ||||| || || ||| || ||| ||
Sbjct 43111226 CACCAAGTGCAAGGTGGACTCTTTCTGA-TATTGTAGTCTGACAGAGTTCGGCCATCTTC 43111284
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || || | || ||||||||||| || || || |||||||| ||||||
Sbjct 43111285 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTG 43111344
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||||| ||| || | ||| |||||| || ||||||||| | ||| | |||||
Sbjct 43111345 GATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTT 43111404
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| |||| || || ||||| | ||||||
Sbjct 43111405 GCCCATCAGGGTCTTCACAAAGAGCTGCAT 43111434
>seq26
Length=38964690
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|||||| | || | || |||||||| | |||||||| || || |||||||| |||
Sbjct 5008495 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 5008436
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| |||||| ||| || |||||||| || || |||| | | |||||| || || ||
Sbjct 5008435 CAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 5008376
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|||||||||||||| || || ||||| | |||| |||||| || ||| ||
Sbjct 5008375 GATGCCCTCCTTGTCCTGGATCTTCGCCTTAACGTTCTCGATGGTGTCACTGGGCTCCAC 5008316
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| | ||| | || || || |||| || || || || |||||||||
Sbjct 5008315 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 5008267
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| ||| || |||||| ||| ||
Sbjct 5007792 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007733
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || |||| | | |||||| || || || ||||||||||||||
Sbjct 5007732 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007673
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| || ||| ||||| | ||| | || ||
Sbjct 5007672 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5007613
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| |||| || || || || |||||||||
Sbjct 5007612 CCCGTCAAGGTCTTCACGAAGATCTGCATG 5007583
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| ||| || |||||| ||| ||
Sbjct 5008020 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007961
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || |||| | | |||||| || || || ||||||||||||||
Sbjct 5007960 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007901
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| || ||| ||||| | ||| | || ||
Sbjct 5007900 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5007841
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| |||| || || || || |||||||||
Sbjct 5007840 CCCGTCAAGGTCTTCACGAAGATCTGCATG 5007811
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| ||| || |||||| ||| ||
Sbjct 5008248 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5008189
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || |||| | | |||||| || || || ||||||||||||||
Sbjct 5008188 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5008129
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| || ||| ||||| | ||| | || ||
Sbjct 5008128 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5008069
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| |||| || || || || |||||||||
Sbjct 5008068 CCCGTCAAGGTCTTCACGAAGATCTGCATG 5008039
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| ||| || |||||| ||| ||
Sbjct 5007564 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007505
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || |||| | | |||||| || || || ||||||||||||||
Sbjct 5007504 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007445
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| || ||| ||||| | ||| | || ||
Sbjct 5007444 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5007385
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || || || ||||||||
Sbjct 5007384 CCCGTCAAGGTCTTCACGAAGATCTGCAT 5007356
>seq5
Length=88915250
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || |||||||| || ||||||||||| | |||||| ||| ||
Sbjct 39533556 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 39533615
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || ||||||| | |||||| || || || |||||||| || ||
Sbjct 39533616 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGG 39533675
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||||| |||||| || ||| ||||| | ||| | || |||
Sbjct 39533676 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 39533735
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || ||||||||
Sbjct 39533736 CCGGTCAGGGTCTTCACGAAGATCTGCAT 39533764
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || |||||||| || ||||||||||| | |||||| ||| ||
Sbjct 39533784 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 39533843
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || ||||||| | |||||| || || || |||||||| || ||
Sbjct 39533844 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGG 39533903
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||||| |||||| || ||| ||||| | ||| | || |||
Sbjct 39533904 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 39533963
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || ||||||||
Sbjct 39533964 CCGGTCAGGGTCTTCACGAAGATCTGCAT 39533992
Score = 113 bits (124), Expect = 4e-20
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 118532 CAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAG 118591
|| ||||| || |||| ||| || ||||||||||| | |||||| ||| || ||
Sbjct 47888014 CAGGTGGAGAGTTGACTTTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAG 47887955
Query 118592 CTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAAT 118651
||| || || || ||||||| | |||||| || || || |||||||| || || ||
Sbjct 47887954 CTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGAT 47887895
Query 118652 TTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCC 118711
|| || || | ||||| |||||| || ||| ||||| | ||| | || |||||
Sbjct 47887894 CTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 47887835
Query 118712 GGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||||| || || ||||||||
Sbjct 47887834 GGTCAGGGTTTTCACGAAGATCTGCAT 47887808
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || |||||||| || ||||||||||| | |||||| ||| ||
Sbjct 39534012 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 39534071
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || ||||||| | |||||| || || || |||||||| || ||
Sbjct 39534072 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGG 39534131
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||||| |||||| || ||| ||||| | ||| | || |||
Sbjct 39534132 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 39534191
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||| || || ||| ||||
Sbjct 39534192 CCGGTTAGGGTTTTCACGAAGATCGGCAT 39534220
>seq39
Length=123869142
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||||||||| | || || ||||| |||||||||||||| ||
Sbjct 84745796 ACCACCACGAAGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 84745737
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| || |||||| || || || || || | || || | ||||||||| |||||
Sbjct 84745736 CAAAGTACGGCCATCCTCCAGTTGCTTGCCCGCAAATATCAGTCTCTGCTGATCAGGAGG 84745677
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || ||| || || | | ||| | || |||| | ||| ||
Sbjct 84745676 GATTCCTTCCTTATCCAGAATCTTGGCCTTTTCATTTTCTATTGTATCCGAGGGCTCAAC 84745617
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || | || || || || || || || || |||||||||||
Sbjct 84745616 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTCTTAACGAAAATCTGCAT 84745569
>seq15
Length=64190966
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/155 (74%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGA-TCGGGAGGTATGCCCTCCTT 118642
||||| ||||| ||||| | || ||| ||||||| || | ||| |||||||||||
Sbjct 16112453 TCCTCTGACTGTTGGCCAGCAAAAATCAGATGCTGCTGGGTCAGCAGG-ATGCCCTCCTT 16112395
Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
|||| ||||| ||| | | || ||||||| || ||||||||||| |||||
Sbjct 16112394 GTCTTGGATTTTGGCTTTGGCATTCTCAGTGGTGTCCCTGGGCTCGACCTCGAGGGTCAT 16112335
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 118737
|| |||||||| || || || ||||| |||||||
Sbjct 16112334 GGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCA 16112300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433813121077456
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