Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq12 91.5 3e-13
>seq12
Length=72498081
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||||| ||||| || ||||| || ||||||||| | || |||||
Sbjct 40850030 GCATTTTTTGGAGCACAGCTGAATTCCTTCATCCACGTGATTATGTACTCATACTATGGG 40849971
Query 52117 ATGGCCGCTTGTGGTCC-TATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| | || | ||| || | ||||| |||||||| ||||||||||| || | || ||
Sbjct 40849970 TTAACTGCATTTGGCCCGTGGATTCAG-AAGTATCTTTGGTGGAAACGATACTTAACCAT 40849912
Query 52176 AATGCAGTTGGT 52187
||||| ||||
Sbjct 40849911 GTTGCAGCTGGT 40849900
Score = 89.7 bits (98), Expect = 9e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| |||||||| | | || || || || || |||| |||||| |||||||| ||
Sbjct 40847431 GGTTCAGTTCCACGTGACCATTGGGCACACGGCGCTGTCTCTTTACACTGATTGCCCCTT 40847372
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
||||||||||| || ||| | | || |||| | || || |||||||| || |||
Sbjct 40847371 CCCAAAATGGATGCACTGGGCTCTCATCGCCTATGCAATCAGCTTCATATTTCTCTTTCT 40847312
Query 52305 TAACTTCTATTTTAGAACATACAA 52328
|||||||||| || | ||||||||
Sbjct 40847311 TAACTTCTATGTTCGGACATACAA 40847288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923159087410720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |