Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq19 136 3e-27 >seq19 Length=53741614 Score = 136 bits (150), Expect = 3e-27 Identities = 206/293 (70%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037 || || || || || || ||| | || || || || ||||| | || || | | ||||| Sbjct 21177882 GACCGCACGGGCACGGGCACGCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTGAGA 21177941 Query 20038 AATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTA 20097 |||||||||| | | || || ||||| ||||||||||| || ||| | || ||||| Sbjct 21177942 GATGAATTTCCTCTGCTGACAACCAAACGTGTATTTTGGAAGGGTGTTTTGGAGGAGTTG 21178001 Query 20098 TTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATT 20157 | |||||||| || ||||| ||||| ||| || || | ||||| || || Sbjct 21178002 CTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAACTGTCTTCCAGGGGAGTGAAAATC 21178061 Query 20158 TGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAG 20217 ||| || |||| ||| | ||||| ||||| ||||| | |||||| |||| Sbjct 21178062 TGGGATGCCAATGGGTCTCGAGACTTTTTGGACAGCCTGGGATTCGCCAACCGAGAAGAA 21178121 Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATA 20270 |||||||| || || | ||||| ||||| ||||| |||||||| || ||||| Sbjct 21178122 GGGGATTTAGGCCCAATTTATGGCTTTCAGTGGAGGCATTTTGGGGCAGAATA 21178174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399168101000260