Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq17 138 2e-27 seq21 116 5e-21 >seq17 Length=64289059 Score = 138 bits (152), Expect = 2e-27 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| ||||| |||||||||||||| || ||||| ||||| || || | Sbjct 7110694 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCCCGTTTCT 7110635 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| |||||||| || || ||||||||||||||||| || || ||||||| Sbjct 7110634 TGAGCCAGAATATTGACGCAAAAGAACCCGAAAAGAAGATTCCTTCCACGGCAGCAAAGG 7110575 Query 50102 CAACAA 50107 | |||| Sbjct 7110574 CCACAA 7110569 Score = 93.3 bits (102), Expect = 6e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| |||||| || || | ||||||||||| || || || |||||||| ||||| Sbjct 7108469 ATCTTTAATATAAGTGTCAATGAGGAGACTATACATCTCAGAGTGGATGTTTTCCATGGC 7108410 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325 || || || || |||||||| | || || |||||||| |||||| Sbjct 7108409 AATTTGGAAGCCATAGAAACAGCGGGCTTCCGTAATCTGAACTTCT 7108364 >seq21 Length=50858623 Score = 116 bits (128), Expect = 5e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| || || ||||| ||||| || || || |||||||| ||||| | Sbjct 26626588 ACCTGAAATTCTCCTGATAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 26626529 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || ||||||||||||| ||| ||||||||||| || || ||||| || || | | |||| Sbjct 26626528 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 26626469 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 26626468 CTGTTTCTTACACCATA 26626452 Score = 109 bits (120), Expect = 8e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 || |||||||| || || | || | ||| | ||||| || ||||| || ||||| ||| Sbjct 26621648 TAGGTTTCATATGGCCCATGCTCCTTGGCCAGGTCACAGCTGGCCTCCAAGGCTCCATAA 26621589 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||||||||| || || | |||||| || || |||||| | || ||||| ||||| Sbjct 26621588 TAAATGGTTTCAAAGATTTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCAAAAGGATAC 26621529 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | | |||||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 26621528 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 26621469 Query 79480 TTATTAGA 79487 ||||| || Sbjct 26621468 TTATTTGA 26621461 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| || ||||| |||||||||||||| | || || || |||| | || Sbjct 26616515 ACTCGTTTCATGAACAGATCTGGAATCCAAAGAGCAAAGAAAAGGTCCCTGGCACGCTGT 26616456 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || ||||| || ||||| || | ||| || ||| | | ||| || ||||||| ||| Sbjct 26616455 TCTTCCTTTCCCGTGTTCTTCTTTAAATCAAGAAACTCAAAAATGTCTAAATGCCAAGGT 26616396 Query 80059 TCCAAGTATATGGC 80072 |||| ||| || || Sbjct 26616395 TCCAGGTAAATAGC 26616382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718239458719520