Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq39 87.8 3e-12 >seq39 Length=123869142 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/153 (74%), Gaps = 11/153 (7%) Strand=Plus/Plus Query 125009 GTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGA 125068 ||| |||| |||||| | ||||| || || ||| |||| ||||||||||| | ||||| Sbjct 94449864 GTACCATGGTATTTGGCAGATGTATAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGA 94449923 Query 125069 GGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA 125128 ||| ||||| ||||||||| | | ||||| || || | | || ||||| |||| Sbjct 94449924 GGTGGATCTTTCCAAGGACATTCAGCATTGG--GAATCCT----CGAAACCTGAG-GAGA 94449976 Query 125129 G----TTTATATCGCACATTTTGGCCTTCTTTG 125157 | |||||| | || |||||||| ||||||| Sbjct 94449977 GATATTTTATACCCCATATTTTGGCTTTCTTTG 94450009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741028927731680