Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq7 129 5e-25
>seq7
Length=80974532
Score = 129 bits (142), Expect = 5e-25
Identities = 118/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 128877 TACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATGCCG 128936
||||| || ||||| || || || |||||||| |||||||||||||| |||||||||||
Sbjct 5935731 TACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCC 5935672
Query 128937 CAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAGCTC 128996
| ||| || || |||| || |||||||| | ||||| ||||| |||||||| ||||||
Sbjct 5935671 CGGGCTGAGAACCACGACCCAGACATCAAGAACCACGTGAACTCCCTGGGAGAGAAGCTC 5935612
Query 128997 AAAACGCTGCGTCTTCGACTGCGTCGCTG 129025
|| || || | || | ||||| |||||
Sbjct 5935611 AAGACCCTCAGGCTGAGGCTGCGACGCTG 5935583
Score = 82.4 bits (90), Expect = 7e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151
||| ||||| ||| || ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 5933579 GCTCCAGGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 5933520
Query 129152 AGAATCATACATGAC 129166
|||| | ||||||||
Sbjct 5933519 AGAAACCTACATGAC 5933505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447732109396160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |