Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq7 129 5e-25 >seq7 Length=80974532 Score = 129 bits (142), Expect = 5e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 128877 TACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATGCCG 128936 ||||| || ||||| || || || |||||||| |||||||||||||| ||||||||||| Sbjct 5935731 TACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCC 5935672 Query 128937 CAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAGCTC 128996 | ||| || || |||| || |||||||| | ||||| ||||| |||||||| |||||| Sbjct 5935671 CGGGCTGAGAACCACGACCCAGACATCAAGAACCACGTGAACTCCCTGGGAGAGAAGCTC 5935612 Query 128997 AAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || || | || | ||||| ||||| Sbjct 5935611 AAGACCCTCAGGCTGAGGCTGCGACGCTG 5935583 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151 ||| ||||| ||| || ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 5933579 GCTCCAGGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 5933520 Query 129152 AGAATCATACATGAC 129166 |||| | |||||||| Sbjct 5933519 AGAAACCTACATGAC 5933505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447732109396160