Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq39 89.7 4e-13
>seq39
Length=123869142
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | || ||||| | |||| | ||| |||||||||||||||||| ||||
Sbjct 84745796 ACCACCACGAAGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 84745737
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | |||||||| ||||| || | | || | | ||||||||| ||
Sbjct 84745736 CAAAGTACGGCCATCCTCCAGTTGCTTGCCCGCAAATATCAGTCTCTGCTGATCAGGAGG 84745677
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||| |||| ||| || ||| | |||| ||||| | | |||
Sbjct 84745676 GATTCCTTCCTTATCCAGAATCTTGGCCTTTTCATTTTCTATTGTATCCGAGGGCTCAAC 84745617
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||||| || ||||| || || || || || || || |||||||||||| ||
Sbjct 84745616 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTCTTAACGAAAATCTGCATCTTG 84745565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421234422091268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |