Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq7 129 6e-25 >seq7 Length=80974532 Score = 129 bits (142), Expect = 6e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 10145 TACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAATGCCA 10204 |||||||| || || |||||||| || ||||||||||||||| ||||||| || ||||| Sbjct 5935731 TACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCC 5935672 Query 10205 CAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGAATCTA 10264 | |||||| || || ||||| || ||| | ||||||||||| ||||| ||||| || Sbjct 5935671 CGGGCTGAGAACCACGACCCAGACATCAAGAACCACGTGAACTCCCTGGGAGAGAAGCTC 5935612 Query 10265 AAGACCCTAAGGCT 10278 |||||||| ||||| Sbjct 5935611 AAGACCCTCAGGCT 5935598 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| ||||| ||||| |||||||||||||||||||| |||||||| || || ||||| | Sbjct 5933580 AGCTCCAGGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5933521 Query 10419 TAGAAGCATACATGACCATGA 10439 ||||| | |||||||| |||| Sbjct 5933520 TAGAAACCTACATGACAATGA 5933500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547356839559680