Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq7 129 6e-25
>seq7
Length=80974532
Score = 129 bits (142), Expect = 6e-25
Identities = 109/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 10145 TACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAATGCCA 10204
|||||||| || || |||||||| || ||||||||||||||| ||||||| || |||||
Sbjct 5935731 TACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCC 5935672
Query 10205 CAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGAATCTA 10264
| |||||| || || ||||| || ||| | ||||||||||| ||||| ||||| ||
Sbjct 5935671 CGGGCTGAGAACCACGACCCAGACATCAAGAACCACGTGAACTCCCTGGGAGAGAAGCTC 5935612
Query 10265 AAGACCCTAAGGCT 10278
|||||||| |||||
Sbjct 5935611 AAGACCCTCAGGCT 5935598
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| ||||| ||||| |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 5933580 AGCTCCAGGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5933521
Query 10419 TAGAAGCATACATGACCATGA 10439
||||| | |||||||| ||||
Sbjct 5933520 TAGAAACCTACATGACAATGA 5933500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547356839559680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |