Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq7 167 3e-36
>seq7
Length=80974532
Score = 167 bits (184), Expect = 3e-36
Identities = 209/287 (73%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 8690 AACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATC 8749
|| ||||| || || ||||| | |||| ||||||||||| | ||| | |||| |||
Sbjct 19669833 AATGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGGATTGAGGCAGTGTTGATGATT 19669892
Query 8750 CCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACG 8809
||| || || ||||| || |||||||| || |||||||| | || || ||||||
Sbjct 19669893 TTAAAGCCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTCAGGTGAACAGATGGGA 19669952
Query 8810 TTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAG 8869
|| |||| || ||||| | ||| || || || |||| || | ||| ||||||| |||
Sbjct 19669953 TTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTACCATGGTCTCACCAAAG 19670012
Query 8870 ATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATG 8929
||||| | ||||| |||||||| ||||||| | | |||| ||||| || || ||
Sbjct 19670013 ATGGCATCTGGACGAGGCTTTTCTACCAAGAGGGCAGGATACAGCTCCATGGCATCAATA 19670072
Query 8930 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT 8976
|| || ||||||||| | | ||||| |||||||| ||||||||
Sbjct 19670073 TCACCATAAAGGGCCTCCAACCCCGCAGCCATTTCCTTCTCTCCTGT 19670119
Score = 138 bits (152), Expect = 2e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 9649 TCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTG 9708
|| ||| ||||||||| || || |||| || ||||| ||||||||||| || ||||
Sbjct 19671369 TCATCATCCCATTCTGGGTGCTCCTGTTTAAGCACATCACACACTCTGTTATGCTCCCGC 19671428
Query 9709 AGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACA 9768
||||| || || || |||||||| |||||||||||||| ||||| |||| || || |||
Sbjct 19671429 AGCCAAATGGTGGCATACATCATCAGACCAGGCACCAGACCAAAGACCTCCTGGCCCACA 19671488
Query 9769 GCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTG 9828
|| | ||| | ||| || || | || || |||||||| | ||||| |||||||
Sbjct 19671489 GCAAACTGCAGGTGTTCAGGAACATGAGGTGGGTAGATCATCTCGACCTGAGTATCTTTG 19671548
Query 9829 ACCGAGGGGGGATACATTTCACCGTCAAT 9857
|| | || ||||||| || || |||||
Sbjct 19671549 ACGGTAGGAGGATACACCTCTCCATCAAT 19671577
Score = 127 bits (140), Expect = 3e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 10027 TTCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAA 10086
||||||||||||| |||| |||||| ||||| || || |||||| ||| ||| | |
Sbjct 19672337 TTCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGA 19672396
Query 10087 AAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGAT 10146
|||| || || || || || ||| |||| || |||||||| | |||||||| |||||||
Sbjct 19672397 AAAATTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTGGTGCCTTGGGGAT 19672456
Query 10147 CGGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGAt 10206
| ||| |||| | || || |||||| |||||||||| | | | ||| || || |
Sbjct 19672457 CAGGAATGAACTTTCTTCGCAGAAGAAACTTTTCCACAATCTCTTTTGAATCAGGAAGCT 19672516
Query 10207 tttttttACCTGGTGAACGAGAA 10229
||| || |||| ||| |||||
Sbjct 19672517 CTTTCTTGCCTGAAGAATGAGAA 19672539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708495856761920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |