Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq7 167 3e-36 >seq7 Length=80974532 Score = 167 bits (184), Expect = 3e-36 Identities = 209/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 8690 AACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATC 8749 || ||||| || || ||||| | |||| ||||||||||| | ||| | |||| ||| Sbjct 19669833 AATGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGGATTGAGGCAGTGTTGATGATT 19669892 Query 8750 CCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACG 8809 ||| || || ||||| || |||||||| || |||||||| | || || |||||| Sbjct 19669893 TTAAAGCCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTCAGGTGAACAGATGGGA 19669952 Query 8810 TTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAG 8869 || |||| || ||||| | ||| || || || |||| || | ||| ||||||| ||| Sbjct 19669953 TTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTACCATGGTCTCACCAAAG 19670012 Query 8870 ATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATG 8929 ||||| | ||||| |||||||| ||||||| | | |||| ||||| || || || Sbjct 19670013 ATGGCATCTGGACGAGGCTTTTCTACCAAGAGGGCAGGATACAGCTCCATGGCATCAATA 19670072 Query 8930 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT 8976 || || ||||||||| | | ||||| |||||||| |||||||| Sbjct 19670073 TCACCATAAAGGGCCTCCAACCCCGCAGCCATTTCCTTCTCTCCTGT 19670119 Score = 138 bits (152), Expect = 2e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 9649 TCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTG 9708 || ||| ||||||||| || || |||| || ||||| ||||||||||| || |||| Sbjct 19671369 TCATCATCCCATTCTGGGTGCTCCTGTTTAAGCACATCACACACTCTGTTATGCTCCCGC 19671428 Query 9709 AGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACA 9768 ||||| || || || |||||||| |||||||||||||| ||||| |||| || || ||| Sbjct 19671429 AGCCAAATGGTGGCATACATCATCAGACCAGGCACCAGACCAAAGACCTCCTGGCCCACA 19671488 Query 9769 GCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTG 9828 || | ||| | ||| || || | || || |||||||| | ||||| ||||||| Sbjct 19671489 GCAAACTGCAGGTGTTCAGGAACATGAGGTGGGTAGATCATCTCGACCTGAGTATCTTTG 19671548 Query 9829 ACCGAGGGGGGATACATTTCACCGTCAAT 9857 || | || ||||||| || || ||||| Sbjct 19671549 ACGGTAGGAGGATACACCTCTCCATCAAT 19671577 Score = 127 bits (140), Expect = 3e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 10027 TTCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAA 10086 ||||||||||||| |||| |||||| ||||| || || |||||| ||| ||| | | Sbjct 19672337 TTCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGA 19672396 Query 10087 AAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGAT 10146 |||| || || || || || ||| |||| || |||||||| | |||||||| ||||||| Sbjct 19672397 AAAATTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTGGTGCCTTGGGGAT 19672456 Query 10147 CGGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGAt 10206 | ||| |||| | || || |||||| |||||||||| | | | ||| || || | Sbjct 19672457 CAGGAATGAACTTTCTTCGCAGAAGAAACTTTTCCACAATCTCTTTTGAATCAGGAAGCT 19672516 Query 10207 tttttttACCTGGTGAACGAGAA 10229 ||| || |||| ||| ||||| Sbjct 19672517 CTTTCTTGCCTGAAGAATGAGAA 19672539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708495856761920