Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=88276631 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || || ||||| || | || || | || || ||| ||| Sbjct 13711230 AATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACTCTGGAGGTGGAGCCCAG 13711289 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | |||||| ||||| || ||||| ||||| || || || || Sbjct 13711290 TGACACCATCGAGAATGTCAAAGGGAAGATCCAAGAAAAAGAGGGCAT-CCCCCTGACCA 13711348 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| |||| | | |||||| || || ||||||| | | | | ||| || || Sbjct 13711349 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGCCCGACTACAA 13711408 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAAT 24225 ||| || || ||||| || | || || || | | ||||| ||||| | |||| Sbjct 13711409 CATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGGTGTCTAAT 13711464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429918876186540