Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 8e-16
seq39 95.1 1e-14
seq7 86.0 5e-12
>seq4
Length=88276631
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || || ||||| ||||| || ||| | || ||| ||||
Sbjct 70238743 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGT 70238802
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | | || ||| ||||| || || || ||| |||| ||| |||
Sbjct 70238803 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 70238862
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || |||| |||||||||||| ||||||||| | ||| || | || || ||
Sbjct 70238863 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAAT 70238922
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| || |||||||| || | || ||||| | | ||||||| ||
Sbjct 70238923 ATCCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGG 70238969
>seq39
Length=123869142
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||| ||||| || || || || ||||| || ||||| || |||| ||| ||
Sbjct 84745566 AAGATGCAGATTTTCGTTAAGACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAGCCC 84745625
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | | ||| || ||| ||||| ||||| |||| ||||
Sbjct 84745626 TCGGATACAATAGAAAATGAAAAGGCCAAGATTCTGGATAAGGAAGGAATCCCTCCTGAT 84745685
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||| ||||| || | ||||||||| ||| | || |||| | || || | || ||
Sbjct 84745686 CAGCAGAGACTGATATTTGCGGGCAAGCAACTGGAGGATGGCCGTACTTTGTCTGACTAC 84745745
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| ||||| ||| ||| | ||||||||| | || || ||
Sbjct 84745746 AACATTCAAAAGGAGTCCACTCCTCATCTTGTGTTGAGACTTCGTGGTGG 84745795
>seq7
Length=80974532
Score = 86.0 bits (94), Expect = 5e-12
Identities = 156/227 (69%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| | ||||| || || || | ||| ||||| || ||| | || ||| ||||
Sbjct 43111434 ATGCAGCTCTTTGTGAAGACCCTGATGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGT 43111375
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| || | | || ||| ||||| || ||||| ||| |||| ||| |||
Sbjct 43111374 GACACCACTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCTGACCAG 43111315
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || |||| |||||||||||| ||||||||| | ||| || | || || ||
Sbjct 43111314 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAAT 43111255
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| ||| |||||||| || | || ||||| | | ||||||| ||
Sbjct 43111254 A-TCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGG 43111209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425327059080160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |