Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq26 105 5e-18
seq4 102 7e-17
seq1 98.7 8e-16
seq5 93.3 3e-14
seq7 89.7 4e-13
>seq26
Length=38964690
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || ||| | ||
Sbjct 5007567 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007508
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| |||||||| ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 5007507 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007448
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 5007447 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5007388
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| || |||| || || || || |||||||||
Sbjct 5007387 TTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007355
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || ||| | ||
Sbjct 5007795 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007736
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| |||||||| ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 5007735 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007676
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 5007675 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5007616
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||| || || || || ||||||||
Sbjct 5007615 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5007584
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || ||| | ||
Sbjct 5008023 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007964
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| |||||||| ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 5007963 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007904
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 5007903 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5007844
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||| || || || || ||||||||
Sbjct 5007843 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5007812
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || ||| | ||
Sbjct 5008251 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5008192
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| |||||||| ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 5008191 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5008132
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 5008131 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5008072
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||| || || || || ||||||||
Sbjct 5008071 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5008040
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| || |||||||| || ||||||||||||| || ||| | ||
Sbjct 5008480 CAGGACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 5008421
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| |||||||| ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 5008420 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 5008361
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 5008360 CTGGATCTTCGCCTTAACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 5008301
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||| || || || || ||||||||
Sbjct 5008300 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5008268
>seq4
Length=88276631
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| |||| |||||||| || || || |||||||| | |
Sbjct 70238969 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGGATATTGTAGTCTGAC 70238910
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || || | |||||||||||| |||| || ||||| ||||| ||
Sbjct 70238909 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG 70238850
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| ||||| || || ||| || || | | | ||||| | ||||||
Sbjct 70238849 ATGCCCTCCTTGTCTTGGATTTTGGCT--TTGACATTTTCAATGGTGTCACTGGGCTCGA 70238792
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||| ||||| || ||||| || || ||||| ||||||||
Sbjct 70238791 CCTCAAGGGTGATAGTTTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 70238743
Score = 98.7 bits (108), Expect = 8e-16
Identities = 151/214 (71%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| ||||| ||||| || ||||||||||||| || ||| | ||
Sbjct 13711442 CAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGCAGGGTGCGCCCATC 13711383
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| |||||||| ||| | || | || ||| |||| || || | ||||||||| ||
Sbjct 13711382 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGT-CAGGGGGATGCCCTCTTTTTC 13711324
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
|| | | || || | | | ||||| | ||||||| |||| ||||||||
Sbjct 13711323 TTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 13711264
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| || |||| || || ||||| |||||||||
Sbjct 13711263 CTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711230
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||| | || ||| | ||
Sbjct 13711213 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATCT 13711154
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| ||||||| ||| | || | || ||| ||||| || | ||| || |||||
Sbjct 13711153 TCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 13711094
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| ||||| ||| || | | | ||||| ||||||| |||| |||||||
Sbjct 13711093 TGGATCTTTGC--CTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTGATGG 13711036
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || || |||| || || || || ||||||||
Sbjct 13711035 TCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13711002
>seq1
Length=122678785
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 16719 GCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGG 16778
||| ||| |||| ||||| ||||||||||| || ||||||||||||| || |||
Sbjct 14875181 GCCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACC 14875240
Query 16779 CGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTT 16838
| || || | |||||||| ||| | || | || ||| ||||| || | ||||||||
Sbjct 14875241 CATCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTT 14875300
Query 16839 TGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
| || || | | || || | | | ||||| | ||||||| |||| |||||
Sbjct 14875301 TTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGA 14875360
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || || |||| || || || || ||||||||
Sbjct 14875361 TGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14875397
>seq5
Length=88915250
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/209 (70%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||| || || |||||||| || | | || | | || |||| ||
Sbjct 47888010 TGGAGAGTTGACTTTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGC 47887951
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | || |||| ||| ||||| || | ||||||||| || || ||
Sbjct 47887950 TTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTG 47887891
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| |||||| | | | ||||| | ||||||| |||| ||||||||| || ||||
Sbjct 47887890 GC--CTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGG 47887833
Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|||| ||||| || || ||||||||||||
Sbjct 47887832 TCAGGGTTTTCACGAAGATCTGCATTTTG 47887804
>seq7
Length=80974532
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/229 (69%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| |||| |||||||| || || || |||||||| | |
Sbjct 43111209 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTGAC 43111267
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || || | |||||||||||| |||| || ||||| ||||| ||
Sbjct 43111268 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111327
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||||||||| || || ||| || || | | ||||| | ||||||
Sbjct 43111328 ATGCCCTCTTTGTCTTGGATTTTGGCT--TTGACATTTTCAGTGGTGTCACTGGGCTCGA 43111385
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||| ||||| || |||| || || ||||| | ||||||
Sbjct 43111386 CCTCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGAGCTGCAT 43111434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405071865851320
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