Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq39 145 8e-30
seq17 96.9 4e-15
>seq39
Length=123869142
Score = 145 bits (160), Expect = 8e-30
Identities = 290/423 (69%), Gaps = 5/423 (1%)
Strand=Plus/Minus
Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331
||||| | || | || ||| ||||| ||||| ||||||| | ||| || || || ||
Sbjct 94450248 ATCCAATGCAAGGTCCGATCTGCTTTCTTCTTTATACAAGACATTGTCTCAATGGCATTG 94450189
Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391
|| || | || | || | |||||| || | || | || | || ||||||
Sbjct 94450188 AAGAGAAATTCCCTTTCTTTAGAATCTTTAATAAAAGTGACAATGAGGAGGCTATACATC 94450129
Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451
||||| | || || |||| ||||||||||||| |||||||| ||||| | |||
Sbjct 94450128 TCAGAGTTGATGTTTTCCACGACAATTTGGAATCCATAGAAACAGAGGGCTTCTATAATC 94450069
Query 93452 TGCACTTCTTGAGAAAATCTCTCTA-CGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
|| |||||||| ||| | ||| | | || | | | || ||||| ||||| ||| |
Sbjct 94450068 TGAACTTCTTGGATAAACCACTCCACCAAGTTATCCTTTTACTATGCCATCACTTGCCAC 94450009
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT-AAGCTTATCCCAAT 93569
||| |||||||| ||||| |||||||| | |||| ||| ||| || | |||||||
Sbjct 94450008 AAAGAAAGCCAAAATATGGGGTATAAAATATCTCTCCTCAGGTTTCGAGGAT-TCCCAAT 94449950
Query 93570 -CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628
| || | || || |||||||| || ||||| | |||||||| || || || |||||
Sbjct 94449949 GCTGA-ATGTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTC 94449891
Query 93629 TTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTA 93688
|| ||||| | ||| || | || || | || | | ||||||| || ||||||
Sbjct 94449890 TTATACATCTGCCAAATACCATGGTACTCGATAAGGAGAATGACAACGTGACAAGGGTTT 94449831
Query 93689 TCT 93691
|||
Sbjct 94449830 TCT 94449828
>seq17
Length=64289059
Score = 96.9 bits (106), Expect = 4e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
|||||| || || | || || | ||| || |||||||||||||| |||||||| |||
Sbjct 7110674 TCATTGGAAAACGTGAGGCCAGGCATCAGGCCCCGTTTCTTGAGCCAGAATATTGACGCA 7110615
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246
||| ||| ||||| || || ||||||||||| ||||| ||||||| |||||
Sbjct 7110614 AAAGAACCCGAAAAGAAGATTCCTTCCACGGCAGCAAAGGCCACAACCCGTTC 7110562
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412
|||||| || || || || || | ||| |||||| ||||| |||| || |||||
Sbjct 7108471 GAATCTTTAATATAAGTGTCAATGAGGAGACTATACATCTCAGAGTGGATGTTTTCCATG 7108412
Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462
||||||||||| || |||||||| | |||||||| ||||| ||||||||
Sbjct 7108411 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCCGTAATCTGAACTTCTTG 7108362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556838052236320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |