Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq19 98.7 9e-16
seq7 93.3 4e-14
>seq19
Length=53741614
Score = 98.7 bits (108), Expect = 9e-16
Identities = 236/355 (66%), Gaps = 4/355 (1%)
Strand=Plus/Minus
Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGC 20593
|||||||| ||||||||||| || || |||| || || |||||||| || || ||
Sbjct 21178168 GCCCCAAAATGCCTCCACTGAAAGCCATAAATTGGGCCTAAATCCCCTTCTTCTCGGTTG 21178109
Query 20594 GCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCT 20653
|| | || | | | ||| || || | || ||||| ||||| || || |||||
Sbjct 21178108 GCGAATCCCAGGCTGTCCAAAAAGTCTCGAGACCCATTGGCATCCCAGATTTTCACTCCC 21178049
Query 20654 GTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACT 20713
| || || ||| | | || || ||||| | |||||| |||| ||| | ||
Sbjct 21178048 CTGGAAGACAGTTCCTTAGCGTTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAA 21177989
Query 20714 ACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAGTGGTCCCGCAGACTATAC 20773
|| || |||||| || || || || || || | ||||| | || | ||| || ||
Sbjct 21177988 ACACCCTTCCAAAATACACGTTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAG 21177929
Query 20774 CTGGCCTGCATGCCAAATAGAGAGAGGGTGCCTATGCCGGTGCGGTCGAGTCGATCGCTG 20833
| ||||||||||| || | || || ||||| |||| |||||||| || || |
Sbjct 21177928 CGCGCCTGCATGCCGAACACCGACAGCGTGCCCGTGCCCGTGCGGTC--GTGCTTCCGGG 21177871
Query 20834 CCACG--GCACAAAATTTCCCTCAACTGCCTGAGATACTGAAGTTCCTCGTGGGG 20886
|| || || || || | | || ||||| || ||||| || ||| |||||||
Sbjct 21177870 CCCCGCAGCTCAGGATGTGCTCCACCTGCCCCAGGTACTGCAGCTCCCCGTGGGG 21177816
>seq7
Length=80974532
Score = 93.3 bits (102), Expect = 4e-14
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308
|| || | ||| || || | |||| |||||||| ||||| || || || |||| |||
Sbjct 67495347 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACGCCCAGCCCC 67495288
Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368
|||||||| |||||||| || ||||| ||||| |||||||||| | ||||| || ||
Sbjct 67495287 ATGTCTCCTGACCTCTGGTATAGCTGGCAGGACAGCTCACCGTTCACCACATAGAACTGG 67495228
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCA 20399
|| | || || || || || |||||||
Sbjct 67495227 CAGAGGGCATGGCACGGAGGTAGGGCCATCA 67495197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441354769921120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |