Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 6e-23
seq4 122 2e-22
seq39 113 1e-19
seq7 109 1e-18
seq6 98.7 2e-15
seq21 96.9 8e-15
seq1 87.8 4e-12
>seq5
Length=88915250
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | || || ||||| |||
Sbjct 39533574 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 39533633
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || |||||||||||||| || || ||||| |||
Sbjct 39533634 ATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTT 39533693
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| |||||||| ||||| |||
Sbjct 39533694 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 39533753
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 39533754 AAGATCTGCAT 39533764
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | || || ||||| |||
Sbjct 39533802 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 39533861
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || |||||||||||||| || || ||||| |||
Sbjct 39533862 ATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTT 39533921
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| |||||||| ||||| |||
Sbjct 39533922 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 39533981
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 39533982 AAGATCTGCAT 39533992
Score = 123 bits (136), Expect = 6e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 288285 TTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGAT 288344
||| ||||| || || || | || ||||| || ||||| | || || ||||| |||||
Sbjct 47887996 TTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGAT 47887937
Query 288345 CAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTC 288404
|| | ||| || | ||||| || |||||||||||||| || || |||||||||||
Sbjct 47887936 GAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTTTC 47887877
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || | || || || || ||||| ||||| |||||||| || || |||||
Sbjct 47887876 GATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAA 47887817
Query 288465 TATCTGCATTATG 288477
||||||||| ||
Sbjct 47887816 GATCTGCATTTTG 47887804
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | || || ||||| |||
Sbjct 39534030 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 39534089
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || |||||||||||||| || || ||||| |||
Sbjct 39534090 ATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTT 39534149
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| ||||| || || || |||
Sbjct 39534150 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACG 39534209
Query 288463 AATATCTGCATT 288474
|| ||| |||||
Sbjct 39534210 AAGATCGGCATT 39534221
>seq4
Length=88276631
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | || | ||| ||||| |||||||| ||||| |
Sbjct 70238969 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGGATATTGTAGTCTGAC 70238910
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||||| ||||| || || || ||||||||||| || | |||
Sbjct 70238909 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG 70238850
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||||||| ||||| || ||||| || | || || | || ||
Sbjct 70238849 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACC 70238790
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || ||||| ||||| || || ||||||||
Sbjct 70238789 TCAAGGGTGATAGTTTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 70238743
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||| | || | || ||| | || ||| | | || || ||||| |||
Sbjct 11743227 TCTTTCTGGATATTGTTATCAGAAAGAGTGTGGCCCTCTCCCAGCTGCTTGCCTGCAAAG 11743286
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||||| | |||||| || |||||||||||||| || || ||||| ||
Sbjct 11743287 ATGAGCCTCTGTTTTTCAGGTGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTC 11743346
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| || | || || || || |||| ||||| | ||||| || || | |
Sbjct 11743347 TCGATGGTATCTCTAGGCTCCACCTCCAGGATGATGGTCTTGACAGTCAGGGTTTTCATG 11743406
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 11743407 AAGATCTGCAT 11743417
>seq39
Length=123869142
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || |||||| ||| || ||||| || || ||||| |
Sbjct 84745795 CCACCACGAAGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 84745736
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | ||| || || || || ||||| | ||| ||| | |||
Sbjct 84745735 AAAGTACGGCCATCCTCCAGTTGCTTGCCCGCAAATATCAGTCTCTGCTGATCAGGAGGG 84745676
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| |||||| | || || || || | |||||||| | ||| | || ||
Sbjct 84745675 ATTCCTTCCTTATCCAGAATCTTGGCCTTTTCATTTTCTATTGTATCCGAGGGCTCAACC 84745616
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| || || ||||| ||||| ||||||||
Sbjct 84745615 TCGAGAGTGATGGTCTTCCCCGTAAGGGTCTTAACGAAAATCTGCAT 84745569
>seq7
Length=80974532
Score = 109 bits (120), Expect = 1e-18
Identities = 161/227 (71%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | || | ||| ||||| || ||||| ||||| |
Sbjct 43111209 CCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTGAC 43111267
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||||| ||||| || || || ||||||||||| || | ||||
Sbjct 43111268 AGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 43111327
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || ||||| || |||||||| ||||| || ||||| | | || || | || ||
Sbjct 43111328 ATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACC 43111387
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || |||| ||||| || || | ||||||
Sbjct 43111388 TCAAGGGTGATAGTTTTGCCCATCAGGGTCTTCACAAAGAGCTGCAT 43111434
>seq6
Length=77573801
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/191 (72%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || |||| || ||||| | || || ||||| | |
Sbjct 46134205 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCCAGCTGCTTACCTGCAACG 46134264
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||| | || |||||||||||||| || || ||||| |||
Sbjct 46134265 ATGAGCCTCTGCTGGTCAGGGGGG-TGCCCTCTTTATCCTGGATCTTGGCCTTCACATTT 46134323
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| || || | || || || || || || ||||| | |||||| ||||| | |
Sbjct 46134324 TCAATAGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCAGGTCAGGGTCTTCAGG 46134383
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 46134384 AAGATCTGCAT 46134394
>seq21
Length=50858623
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || | || | || ||| | || ||||| | || || ||||| |||
Sbjct 29349529 TCTTTCTGGATGTTGTCATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAG 29349470
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || |||||||||||||| || || ||||| |||
Sbjct 29349469 ATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTT 29349410
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || |||| |||| | |||||| ||||| | |
Sbjct 29349409 TCGATGGTGTCACTGGGCTCCACCTCCAGGATGATGATCTTGCTGGTCAGGGTCTTCATG 29349350
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 29349349 AAGATCTGCAT 29349339
>seq1
Length=122678785
Score = 87.8 bits (96), Expect = 4e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || |||| || ||||| | | || ||||| |||
Sbjct 93617936 TCTTTCTGGATGTTGTAATCAGAAAGGATGCGGCCATCTTCCAGCTTCTTGCCTGCAAAG 93617995
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| ||| ||||||| ||||| || || ||||| |||
Sbjct 93617996 ATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATCTTGGCCTTCACATTT 93618055
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| | | || || | || || || || |||| || || | || ||| ||||| | |
Sbjct 93618056 TCGTTGGTGTCACTGGGCTCAACCTCCAGGATGATGGTATTGCAGGCCAGGGTCTTCATG 93618115
Query 288463 AATATCTGCAT 288473
|||||||||||
Sbjct 93618116 AATATCTGCAT 93618126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179605006395704
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