Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq39 87.8 2e-12
seq4 86.0 6e-12
seq1 86.0 6e-12
seq26 82.4 8e-11
seq21 82.4 8e-11
>seq39
Length=123869142
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||||||||| || |||||| ||||| ||||| || || | |
Sbjct 84745762 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCCTCCAGTTGCTTGCCCGCA 84745703
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| || || | ||| || || ||||| || ||||| || || || | || | ||||
Sbjct 84745702 AATATCAGTCTCTGCTGATCAGGAGGGATTCCTTCCTTATC-CAGAATCTTGGCCTTTTC 84745644
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| ||| | || || | | ||| ||||||| || | || || || || || || |
Sbjct 84745643 ATT-TTCTATTGTATCCGAGGGCTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTCT 84745585
Query 138599 TTACAAAAATCTGCAT 138614
| || |||||||||||
Sbjct 84745584 TAACGAAAATCTGCAT 84745569
>seq4
Length=88276631
Score = 86.0 bits (94), Expect = 6e-12
Identities = 156/227 (69%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || | ||| |||| || || || | | || ||||| || |||||||||||| |
Sbjct 13711456 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGC 13711397
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || ||| || || || ||||| |||| | |||| | | ||| ||||| || ||
Sbjct 13711396 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGG-GGG 13711338
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || ||||| || ||| || ||| | | || | |||||| | | |||||||
Sbjct 13711337 ATGCCCTCTTTTTCTTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACC 13711278
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || |||||||||| || || ||||| ||||||||
Sbjct 13711277 TCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13711231
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || || | | || || || ||||| | || |
Sbjct 13711195 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGGCA 13711136
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || ||||| ||||| ||| ||| || |
Sbjct 13711135 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACA 13711076
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || |||||||||| || ||
Sbjct 13711075 TTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTGATGGTCTTACCAGTCAAGGTCTTC 13711016
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 13711015 ACGAAGATCTGCATG 13711001
>seq1
Length=122678785
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || | | || || || ||||| |||| |
Sbjct 14875204 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCTAGCTGTTTGCCGGCA 14875263
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || || ||||| || ||| || ||| |
Sbjct 14875264 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGGATCTTCCCTTTGACA 14875323
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || |||||||||| || ||
Sbjct 14875324 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTC 14875383
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 14875384 ACGAAGATCTGCATG 14875398
>seq26
Length=38964690
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || ||| || || || ||||| |||| |
Sbjct 5007777 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCA 5007718
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || || || ||||| ||| || || |
Sbjct 5007717 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 5007658
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || ||||| |||| || ||
Sbjct 5007657 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTC 5007598
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 5007597 ACGAAGATCTGCATG 5007583
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || ||| || || || ||||| |||| |
Sbjct 5008005 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCA 5007946
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || || || ||||| ||| || || |
Sbjct 5007945 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 5007886
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || ||||| |||| || ||
Sbjct 5007885 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTC 5007826
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 5007825 ACGAAGATCTGCATG 5007811
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || ||| || || || ||||| |||| |
Sbjct 5008233 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCA 5008174
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || || || ||||| ||| || || |
Sbjct 5008173 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 5008114
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || ||||| |||| || ||
Sbjct 5008113 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTC 5008054
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 5008053 ACGAAGATCTGCATG 5008039
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || | ||| |||| || || || | | |||||||| || |||||||||||| |
Sbjct 5008494 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 5008435
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || ||| || || || ||||| |||| | |||| | | ||| ||||| || ||
Sbjct 5008434 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 5008375
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||| | | |||||||
Sbjct 5008374 ATGCCCTCCTTGTCCTGGATCTTCGCCTTAACGTTCTCGATGGTGTCACTGGGCTCCACC 5008315
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|| | || | || ||||| |||| || || || || |||||||||
Sbjct 5008314 TCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 5008267
>seq21
Length=50858623
Score = 82.4 bits (90), Expect = 8e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701
|||| || || || | ||| |||||||||||||| || ||||| || ||||| |||
Sbjct 26618041 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAAGTTCTGCTGGTTG 26617982
Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739
||||| ||||| || | |||||| |||||||||||||
Sbjct 26617981 CTTTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 26617944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496242127680960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |