Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq7 163 4e-35 seq9 104 3e-17 >seq7 Length=80974532 Score = 163 bits (180), Expect = 4e-35 Identities = 207/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 8891 AACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATG 8950 || ||||| |||||||| || || ||||| ||||| || | || || || | ||| Sbjct 19669833 AATGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGGATTGAGGCAGTGTTGATGATT 19669892 Query 8951 TCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACG 9010 | || ||||| || || || |||||||| || |||||||| | || || |||||| Sbjct 19669893 TTAAAGCCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTCAGGTGAACAGATGGGA 19669952 Query 9011 TTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAG 9070 || |||| || ||||||||||| || || || |||| || | ||| ||||||| ||| Sbjct 19669953 TTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTACCATGGTCTCACCAAAG 19670012 Query 9071 ATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACG 9130 |||||| | ||||| || ||||| || | || | ||| || || || | || || | Sbjct 19670013 ATGGCATCTGGACGAGGCTTTTCTACCAAGAGGGCAGGATACAGCTCCATGGCATCAATA 19670072 Query 9131 TCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || ||||| ||||| |||||| | ||||| || |||||||| ||| Sbjct 19670073 TCACCATAAAGGGCCTCCAACCCCGCAGCCATTTCCTTCTCTCCT 19670117 Score = 152 bits (168), Expect = 7e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 || || || ||| |||| ||| ||||||| ||||| || ||||| || ||||| || || Sbjct 19671354 GTCTGGAATAACCGCTCATCATCCCATTCTGGGTGCTCCTGTTTAAGCACATCACACACT 19671413 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 ||||| || || | |||||| |||||||| |||||||| | ||| ||||| | |||||| Sbjct 19671414 CTGTTATGCTCCCGCAGCCAAATGGTGGCATACATCATCAGACCAGGCACCAGACCAAAG 19671473 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 || || | ||||| ||||| |||| | || || || | || | || | ||| | Sbjct 19671474 ACCTCCTGGCCCACAGCAAACTGCAGGTGTTCAGGAACATGAGGTGGGTAGATCATCTCG 19671533 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCT 9967 ||||| || ||||||||||| || ||||||| || || ||||| |||| Sbjct 19671534 ACCTGAGTATCTTTGACGGTAGGAGGATACACCTCTCCATCAATTACCT 19671582 Score = 138 bits (152), Expect = 2e-27 Identities = 139/178 (78%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| ||||||||| | |||||||| ||||||||| ||| ||| | || Sbjct 19672338 TCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 19672397 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 |||||| || |||||||| || | || || || ||||||| |||||||| |||||||| Sbjct 19672398 AAATTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTGGTGCCTTGGGGATC 19672457 Query 10241 GGGGATAAAGGTCCTCCGAATAA-AAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297 || || || | || || | || ||||||| |||||||||| | ||||||| || || Sbjct 19672458 AGGAATGAACTTTCTTCGCAGAAGAAACTTT-TCCACAATCTCTTTTGAATCAGGAAG 19672514 Score = 105 bits (116), Expect = 1e-17 Identities = 196/286 (69%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 || ||||| || || |||| ||||| || || |||| | || || | | | || Sbjct 19670766 CCAGCAATTTGCCTGCTGAATGATTCCACAAACTGGGTAAGGCCATGTTCCAATAATATA 19670825 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||||| | || |||| | || |||| | ||| |||| | || ||| Sbjct 19670826 GAGTTGTTGTAGATAAACTGTTGGAAATTGTACTCCTGGTCATCTATTTGCAAGGTGTCA 19670885 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| || | ||||||| ||||||| || || ||||| || || || ||||| |||||| Sbjct 19670886 GGCAGGAGGGGATGCCAGTGGTAGAGTGTGTTAAACTCAGCAGCAATGCGGTTTTGGTAC 19670945 Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673 || || | ||| ||| || | ||| |||||||| | |||| |||||| || || | Sbjct 19670946 TGGAATTGTTGGTT--GAAAAGCAGCTCTGGGTCAAACTTCAGCTTGAAGTGATAGCCAC 19671003 Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | | || || ||||| | | || | ||| ||||||||||| || Sbjct 19671004 TCAAGTGTTGTACATAGTCTTCAATCACAATCTTAATGGTTTCTCC 19671049 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | || || || |||||| ||| || || || |||| ||| ||| Sbjct 19672936 TCACCTTTCACACCCATGGGTGTTGGACAGTCATCAGGTACAGGGGGAAGAGCTCTGGTA 19672995 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || ||||| ||||||||||| || ||||| || | | || || Sbjct 19672996 TAATAGGAGAGGTTAGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTTCACATTATAAGTT 19673055 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || ||||| ||||||| | |||| |||| Sbjct 19673056 GGTGGACTCTCAATCAAATGTGACCGGGCT 19673085 >seq9 Length=61074082 Score = 104 bits (114), Expect = 3e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 8963 TCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGC 9022 || || ||||| ||||| || ||||||||| | || || |||||| ||| | | ||| Sbjct 60196030 TCACCACCGAATGTGCTCGGCTTCCAGTACTCTGGAGAACAGATGGGATTCCCTAGGAGG 60196089 Query 9023 CCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGA 9082 || || | ||| || |||||||| | || || || ||||| || ||||||| | ||| Sbjct 60196090 CCCTTAAGGGAGAAGGGAGCCCCAATTTCTATCATACTCTCTCCAAAGATGGAATTTGGA 60196149 Query 9083 CGCGGTTTTTCGACGATGAAGCCA-GTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAG 9141 | || || | || | |||| | ||||| ||| | || || | ||| ||||| || Sbjct 60196150 TGGCACTTCTCCA-GAAGCAGCCCCGGGTAGAATTCCAAGGCATCAATGTCTCCATACAG 60196208 Query 9142 GGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 | ||||||||||| || ||||||||||| ||| Sbjct 60196209 CTCCTCCAACTCGGCTGCCATCTCCTTCTCCCCT 60196242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723698435711200