Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq18 87.8 2e-12
seq12 82.4 1e-10
>seq18
Length=55844845
Score = 87.8 bits (96), Expect = 2e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 14196 CATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCTACCCATTTTTGAAACGTC 14255
||||||||||| ||| ||||||||||| || || | |||| |||| || || || |||
Sbjct 41144366 CATGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTGCCCACTTCTGGAAGGTC 41144307
Query 14256 CCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGACTTTGATCTTCTCCGTCT 14315
|||||||| | || | || || | ||||||| || || | || || || || ||
Sbjct 41144306 CCATCTCCTCCAGGCCTGGTCTCCACAAGCTCTGTGTCCTGGGTCTGGTCCTCCCCATCA 41144247
Query 14316 CGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAAGCCCAGCAC 14366
|| | ||| || | | || || || || || || |||| ||||||||||
Sbjct 41144246 CGCTGCCAGGTCAAGGTGATCTCCGCAGGGTAGAAGCCCAGAGCCCAGCAC 41144196
>seq12
Length=72498081
Score = 82.4 bits (90), Expect = 1e-10
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237
|| ||||| || |||| || |||||||| ||| | |||||| || || || | ||||
Sbjct 985568 CCCTCATGCTGCACGTGGCACGTGTATCTCTGCTCCTGTCCAGAGGGCACCACCACAGCT 985509
Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297
|||| || || || ||||||||||| || || | || || | |||||| || ||
Sbjct 985508 GCCCACTTCTGGAAGGTCCCATCTCCTGCAGGCCTGGTGTCCACAACCTCTGTGTCCTGG 985449
Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357
| || || || || || || | ||| || | | || || || || || || ||||
Sbjct 985448 GTCTGGTCCTCCCCATCCCGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGCCCAGC 985389
Query 14358 GCCCAGCACC 14367
||||||||||
Sbjct 985388 GCCCAGCACC 985379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629257493781280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |