Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq19 143 2e-29
seq7 143 2e-29
seq39 98.7 8e-16
>seq19
Length=53741614
Score = 143 bits (158), Expect = 2e-29
Identities = 208/294 (71%), Gaps = 0/294 (0%)
Strand=Plus/Minus
Query 30159 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30218
||| ||||| || |||||||||||||| || || || | || || | || || |||||
Sbjct 21178175 GTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAATTGGGCCTAAATCCCCTTCTTC 21178116
Query 30219 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30278
| || |||| ||| ||||||||||||||| || || ||||| |||||||| ||
Sbjct 21178115 TCGGTTGGCGAATCCCAGGCTGTCCAAAAAGTCTCGAGACCCATTGGCATCCCAGATTTT 21178056
Query 30279 TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338
|| ||| | || || || || | ||||||||| || ||| |||||||||| |||
Sbjct 21178055 CACTCCCCTGGAAGACAGTTCCTTAGCGTTTGTGGATCCCTTGATAAACCACAGCAACTC 21177996
Query 30339 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAG 30398
||||| || |||||||||| || | ||||| || || || ||||| | | | ||
Sbjct 21177995 CTCCAAAACACCCTTCCAAAATACACGTTTGGTTGTCAGCAGAGGAAATTCATCTCTCAG 21177936
Query 30399 GCCGTACATGGCCTGAGAACCAAACACGGACAAGACTCCCGTGCCCGTCCTGTC 30452
|| ||| ||||| || ||||| |||| ||||||||||| | |||
Sbjct 21177935 GCTGTAGCGCGCCTGCATGCCGAACACCGACAGCGTGCCCGTGCCCGTGCGGTC 21177882
>seq7
Length=80974532
Score = 143 bits (158), Expect = 2e-29
Identities = 130/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
|| || |||| ||| || |||||||| ||||| || | ||||||||||||||| |||||
Sbjct 67495359 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 67495300
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || ||||||||||| || ||||||||||| ||||| || || ||||| |||| |
Sbjct 67495299 ACGCCCAGCCCCATGTCTCCTGACCTCTGGTATAGCTGGCAGGACAGCTCACCGTTCACC 67495240
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032
|| || ||||| || | || ||||||||||| || ||||| ||
Sbjct 67495239 ACATAGAACTGGCAGAGGGCATGGCACGGAGGTAGGGCCATCAG 67495196
Score = 91.5 bits (100), Expect = 1e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 30158 TGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 30217
|||| ||||| || |||||||||||||| || || || | || || | || || ||||
Sbjct 67492838 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAATTGGGCCTAAATCCCCTTCTT 67492779
Query 30218 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 30277
| | || |||| ||| ||||||||||||||| || || ||||| |||||||| |
Sbjct 67492778 CTCGGTTGGCGAATCCCAGGCTGTCCAAAAAGTCTCGAGACCCATTGGCATCCCAGATTT 67492719
Query 30278 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
| || ||| | || || || || | ||||||||| ||
Sbjct 67492718 TCACTCCCCTGGAAGACAGTTCCTTAGCGTTTGTGGATCC 67492679
>seq39
Length=123869142
Score = 98.7 bits (108), Expect = 8e-16
Identities = 127/173 (73%), Gaps = 3/173 (2%)
Strand=Plus/Minus
Query 29791 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 29850
||||| | |||||||| || | ||||| |||||| | || || ||||||| || |
Sbjct 113736671 AGCTGTATTTTCAGCGGCTCAATGTGATTCAGGTAAATATGCGCATCTCCCAAAGTATAT 113736612
Query 29851 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAG--AG- 29907
| || || | || | || || || ||| || |||||||| ||||| || ||
Sbjct 113736611 ATGAAGTCACTTGGCTTCAGGCCTGTCTTGTGTGCAATCATGTAGGTGAGCAGGCGTAGC 113736552
Query 29908 TAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTA 29960
|||||||||||||| ||||| || || ||||||||||| || |||||||||||
Sbjct 113736551 TAGCTGGCGATGTTGAAGGGCACGCCCAGCCCCATGTCTCCTGACCTCTGGTA 113736499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408601325271764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |