Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq39 102 1e-16 >seq39 Length=123869142 Score = 102 bits (112), Expect = 1e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || ||||| || || || | ||| || | ||| || || ||||| || | ||| Sbjct 84745751 AATGTTGTAGTCAGACAAAGTACGGCCATCCTCCAGTTGCTTGCCCGCAAATATCAGTCT 84745692 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| ||||||||||| |||||||| ||||| | || |||| ||| |||| || || Sbjct 84745691 CTGCTGATCAGGAGGGATTCCTTCCTTATCCAGAATCTTGGCCTTTTCATTTTCTATTGT 84745632 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || | |||||| || ||||| || || || || || || || || || || || || Sbjct 84745631 ATCCGAGGGCTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTCTTAACGAAAATCTG 84745572 Query 193358 CATTTT 193363 ||| || Sbjct 84745571 CATCTT 84745566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899617649117760