Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 131 2e-25 seq26 125 6e-24 seq1 118 1e-21 seq7 107 2e-18 seq39 105 6e-18 seq5 87.8 2e-12 >seq4 Length=88276631 Score = 131 bits (144), Expect = 2e-25 Identities = 166/227 (73%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 13711231 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACTCTGGAGGTGGAGCCCAGT 13711290 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| ||||| || || || || || || Sbjct 13711291 GACACCATCGAGAATGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCC-CCTGACCAG 13711349 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| ||||||||||| ||| | | | | || | || || ||| Sbjct 13711350 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGCCCGACTACAAC 13711409 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || |||||||| |||| ||| | ||||| Sbjct 13711410 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 13711456 Score = 122 bits (134), Expect = 8e-23 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || |||||||| || || || || || ||| Sbjct 70238742 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAAACTATCACCCTTGAGGTCGAGCCCAG 70238801 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || ||| || ||||||||||| || || || || || || || Sbjct 70238802 TGACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCA 70238861 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| ||||| || |||||||| || ||| ||| ||||||| || || Sbjct 70238862 GCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAA 70238921 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 || || || || || || | ||||||||| | || |||| || ||| | |||||| Sbjct 70238922 TATCCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGCATCATTGAGCC 70238981 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 13711002 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACTCTGGAGGTGGAGCCCAAT 13711061 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| ||||| || || || || || Sbjct 13711062 GACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 13711121 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||| | ||||||||||| ||| | | | | |||| || || ||| Sbjct 13711122 CAGAGGTTGATCTTTGCCAGCAAACAGCTGGAAGATGGGTGCACCCTGTCTGACTACAAC 13711181 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 13711182 ATCCAGAAGGAGTCCACTCTGCACCTGGT 13711210 >seq26 Length=38964690 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 5008268 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 5008327 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | |||||||| ||||| || || || || || || || Sbjct 5008328 GACACCATCGAGAACGTTAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 5008386 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||| ||||||||||| ||| | | | | |||| || || || Sbjct 5008387 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAA 5008446 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || |||||||| |||| ||| | ||||| Sbjct 5008447 CATCCAGAAGGAGTCTACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 5008494 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || | || ||||| || || || || || || || || Sbjct 5007353 ACAATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCC 5007412 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| ||||| || || || || || || Sbjct 5007413 AGTGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 5007472 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||||||| ||||||||||| ||| | | | | |||| || || Sbjct 5007473 CAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTAC 5007532 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || || || ||| |||| Sbjct 5007533 AACATCCAGAAGGAGTCCACTCTGCACCTGGT 5007564 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 5007584 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 5007643 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 5007644 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 5007703 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| ||||||||||| ||| | | | | |||| || || ||| Sbjct 5007704 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 5007763 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 5007764 ATCCAGAAGGAGTCCACTCTGCACCTGGT 5007792 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 5007812 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 5007871 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 5007872 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 5007931 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| ||||||||||| ||| | | | | |||| || || ||| Sbjct 5007932 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 5007991 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 5007992 ATCCAGAAGGAGTCCACTCTGCACCTGGT 5008020 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 5008040 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 5008099 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 5008100 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 5008159 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| ||||||||||| ||| | | | | |||| || || ||| Sbjct 5008160 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 5008219 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 5008220 ATCCAGAAGGAGTCCACTCTGCACCTGGT 5008248 >seq1 Length=122678785 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || || || || || ||| Sbjct 14875397 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 14875338 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| ||||| || || || || || || Sbjct 14875337 GACACCATCGAGAATGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCAG 14875278 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| |||||||| || ||| | | | | |||| || || ||| Sbjct 14875277 CAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGGTGCACCCTGTCCGACTACAAC 14875218 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || |||||||| |||| Sbjct 14875217 ATCCAGAAGGAGTCCACTCTGCACTTGGTCCTGCG 14875183 >seq7 Length=80974532 Score = 107 bits (118), Expect = 2e-18 Identities = 162/229 (71%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||| ||||| | || || || | || |||||||| || || || || || ||| Sbjct 43111435 GATGCAGCTCTTTGTGAAGACCCTGATGGGCAAAACTATCACCCTTGAGGTCGAGCCCAG 43111376 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| |||| || ||| || |||||||||||||| || || || || || || Sbjct 43111375 TGACACCACTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCTGACCA 43111316 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| ||||| || |||||||| || ||| ||| ||||||| || || Sbjct 43111315 GCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAA 43111256 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | ||| || || || || | ||||||||| | || |||| || ||| Sbjct 43111255 TA-TCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGC 43111208 >seq39 Length=123869142 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || |||| || || || || || || || || ||||| || || || | Sbjct 84745568 GATGCAGATTTTCGTTAAGACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAGCCCTC 84745627 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| | ||| ||||| | || || |||||||| ||||| ||||| Sbjct 84745628 GGATACAATAGAAAATGAAAAGGCCAAGATTCTGGATAAGGAAGGAATCCCTCCTGATCA 84745687 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||| ||||| || || || ||||||||| | | |||| || || || Sbjct 84745688 GCAGAGACTGATATTTGCGGGCAAGCAACTGGAGGATGGCCGTACTTTGTCTGACTACAA 84745747 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || | || | |||||| || | || || || Sbjct 84745748 CATTCAAAAGGAGTCCACTCCTCATCTTGTGTTGAGACTTCGTGGTGG 84745795 >seq5 Length=88915250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 39533764 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 39533705 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| || ||||| || || || || || || Sbjct 39533704 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCGCCTGACCAG 39533645 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||| ||| | | | || ||||| ||| Sbjct 39533644 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 39533585 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || ||| |||| |||| || | || ||| Sbjct 39533584 ATCCAGAAAGAGTCAACTCTCCACCTGGTCCTGCGCCTGAGGGGTGGC 39533537 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 39533992 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 39533933 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| || ||||| || || || || || || Sbjct 39533932 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCGCCTGACCAG 39533873 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||| ||| | | | || ||||| ||| Sbjct 39533872 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 39533813 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || || || || || ||| |||| |||| Sbjct 39533812 ATCCAGAAAGAGTCAACTCTCCACCTGGTCCTGCG 39533778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449879221683040