Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_024382.1
Length=137090
Score E
Sequences producing significant alignments: (Bits) Value
seq26 159 3e-34
>seq26
Length=38964690
Score = 159 bits (176), Expect = 3e-34
Identities = 476/720 (66%), Gaps = 76/720 (11%)
Strand=Plus/Minus
Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130
||||||| |||||||| ||||| ||||||||| || |||| || | | | ||||||||
Sbjct 7173602 CCACAGCCCTAGCTTCAGGTCT-AAAAAGAGTTGGCTTCTTCTGGGGGCAATGGAAGGCA 7173544
Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGT- 1189
||||||||||| ||||| ||||| ||||||| | ||||||||||| ||||||| ||||
Sbjct 7173543 TTTTAAAGAAATGGCTTGGAAAAGAAATCTGTAGAGCACTTACATAGTCTTCCAAAAGTC 7173484
Query 1190 --TTTGAAAATGAGAACTGTAGTTCTGTGATTACAGCTGATTGTATGTCCC---GTGGTA 1244
| || | || ||||| ||| ||| | | | ||| || | ||||||
Sbjct 7173483 CCCTCGACA---AGGGCTGTAATTCCAAGATGA---TTTTTCGTACATCACTTGGTGGTA 7173430
Query 1245 GTGGATG-------GCC--GTGGGAGGAGAGCAAGGCTCCGGAACAGCAGAGCAGGAACA 1295
| |||| ||| |||||||| ||||||| | | | |||||||||||||||
Sbjct 7173429 GCTGATGGGTGGGTGCCATATGGGAGGACAGCAAGGTTTCCATAGAGCAGAGCAGGAACA 7173370
Query 1296 GGGCAAGCCCTGAAGATTTTGTAAAAATAGAGTAATGCCCACACACCCCCACCTGCCC-- 1353
|||||| || || | | || | ||| | | | || || || || ||
Sbjct 7173369 GGGCAAACCTGGATGGTCCTGGAGAAAGAAAATGAT----ACTGTGAGGCAAGTGACCAG 7173314
Query 1354 -CATACCTTAACCTGCCCA----AGCTTTCACCACCGAAGCTGTGCCGGACTGAGCCCCA 1408
|| ||| |||||||| |||| | ||||| ||| || |||| ||||
Sbjct 7173313 ACAGACC-ACCCCTGCCCAGCCCAGCTGTAACCAC--------TGCTGG-CTGAACCCC- 7173265
Query 1409 TCCAGTCTTTCTCTTTGTCTAGGGAAACTCGACCGCACCCACCAGCATCAATGGCTGTAG 1468
||||||||||| || | ||| || || |||| |||| | | || ||| | ||
Sbjct 7173264 TCCAGTCTTTCCCTCTATCTGATGAGACAAGACCAGGCCCA--TGAAACA--GGCAGCAG 7173209
Query 1469 GACCTATCGATACCTGAGGGGGATACTATAGCAGGAGAGAG----CGAGGCCGCCGCTTT 1524
||| ||||||| | |||| | || | ||| ||| | | || ||| ||
Sbjct 7173208 GACACGGTAATACCTGTGTGGGAGAGCATGG--TGAGGGAGCACACAAAGC--CCGTTTC 7173153
Query 1525 GGCAACAGCTGCTAGAGTGAGATGTGCTCGCTATACTTTTAGGGAACTGTATATAAAGGG 1584
||||||||| |||||| |||||||||||| || | || ||| |||||||||||
Sbjct 7173152 AGCAACAGCTTCTAGAGCCAGATGTGCTCGCCATGGTCTTCAGGA--GATATATAAAGGG 7173095
Query 1585 CTAGTTGTAAGG---AGGAGCACTAAAAGTACCGCCCACGGTAAAGTCATTACT------ 1635
|| || ||| | || | || || ||||||| || ||| ||||| ||
Sbjct 7173094 TCAGCTGAGAGGAAAAAGAATGATCAATGTCCCGCCCATGGCAAAATCATTGCTCAGCTT 7173035
Query 1636 -----CAGAAAACATTTCAAATTTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAG 1690
||||||||| ||||| || ||| | | || | |||||| |||| ||||
Sbjct 7173034 TTCTCCAGAAAACA-CTCAAAATTCTGCGGCCAAAGGTTAGGCGAAAGCAGGGCTGGAAG 7172976
Query 1691 GAA---ATGAAGTTACCCTTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGG 1747
||| ||| |||||||| || ||||||||||| |||| || |||| | |||||| ||
Sbjct 7172975 GAAGCGCTGAGGTTACCCTCTAGGTGGGCAGATGCCTGACTCAGTGCAGACACACACAGG 7172916
Score = 93.3 bits (102), Expect = 4e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 171 CACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTTTCAAG 230
||||| || |||||||| |||| |||| |||||| ||||||||||||||||||| | ||
Sbjct 7175612 CACAAAATCCAAAACAGATTATGAGAAGAATTCAATATAATTTATTAAATAATTCCCGAG 7175553
Query 231 GGCTTCTTTAAGAAGCATTAA 251
|||| ||| ||| ||||||||
Sbjct 7175552 GGCTCCTTCAAGGAGCATTAA 7175532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 438542084824000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |