Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 131 2e-25 seq5 125 7e-24 seq7 109 5e-19 seq21 102 8e-17 seq6 100 3e-16 seq1 91.5 1e-13 seq39 89.7 5e-13 seq9 84.2 2e-11 >seq4 Length=88276631 Score = 131 bits (144), Expect = 2e-25 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| |||||||| || || || | | | || || || Sbjct 70238948 AAGTGCAAGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTTCGGCCA-TCTTCTAG 70238890 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| |||||||| |||| || ||||||||||| || |||||||| |||||||| ||| Sbjct 70238889 CTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGAT 70238830 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | |||| ||||| ||||||| || || | ||||| ||||||| Sbjct 70238829 -TTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTTGC 70238771 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || || || |||||||| Sbjct 70238770 CCGTCAGGGTCTTCACAAAGATCTGCAT 70238743 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || || ||| || || || ||||| |||| Sbjct 13711198 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATCTTCCAGCTGTTTGCTG 13711139 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | || ||||||||| || ||||||||||||||||| ||||||| |||| Sbjct 13711138 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTG 13711079 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||| |||||||||| || | |||| ||| || || |||| || Sbjct 13711078 ACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTGATGGTCTTACCAGTCAAGGTC 13711019 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 13711018 TTCACGAAGATCTGCATG 13711001 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133456 AATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCT 133515 |||| | || ||||||||||| ||||||| ||| | ||| || | |||| Sbjct 11743213 AATGGAGAGTTGACTCTTTCTGGATATTGTTATCAGAAAGAGTGTGGCCCTCTCCCAGCT 11743272 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | ||||||| ||| | || || |||||||| || || || ||||| Sbjct 11743273 GCTTGCCTGCAAAGATGAGCCTCTGTTTTTCAGGTGGGATGCCCTCTTTATCCTGGATCT 11743332 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | || || | |||||||| || | | ||| ||| ||| | | Sbjct 11743333 TGGCCTTCACATTCTCGATGGTATCTCTAGGCTCCACCTCCAGGATGATGGTCTTGACAG 11743392 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||||| | ||| ||||||||| Sbjct 11743393 TCAGGGTTTTCATGAAGATCTGCATG 11743418 >seq5 Length=88915250 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 39533568 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 39533626 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 39533627 TGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 39533686 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| || Sbjct 39533687 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 39533746 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 39533747 CTTCACGAAGATCTGCAT 39533764 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 39533796 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 39533854 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 39533855 TGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 39533914 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| || Sbjct 39533915 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 39533974 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 39533975 CTTCACGAAGATCTGCAT 39533992 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || |||| |||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 47888004 GTTGACTTTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 47887946 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 47887945 TGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 47887886 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| || Sbjct 47887885 CACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 47887826 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 47887825 TTTCACGAAGATCTGCAT 47887808 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 39534024 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 39534082 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 39534083 TGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 39534142 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | ||||| ||| |||||||| || || Sbjct 39534143 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGT 39534202 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| ||| |||| Sbjct 39534203 TTTCACGAAGATCGGCAT 39534220 >seq7 Length=80974532 Score = 109 bits (120), Expect = 5e-19 Identities = 153/208 (74%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| |||||||| || || || | | | || || || Sbjct 43111230 AAGTGCAAGGTGGACTCTTTCTG-ATATTGTAGTCTGACAGAGTTCGGCCA-TCTTCTAG 43111287 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| |||||||| |||| || ||||||||||| || |||||||| || ||||| ||| Sbjct 43111288 CTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTGGAT 43111347 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | ||| ||||| ||||||| || || | ||||| ||||||| Sbjct 43111348 -TTTGGCTTTGACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTTGC 43111406 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| || || || || | |||||| Sbjct 43111407 CCATCAGGGTCTTCACAAAGAGCTGCAT 43111434 >seq21 Length=50858623 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||| ||| | ||| | | | || || ||||||||||| Sbjct 29349535 GTTGACTCTTTCTGGATGTTGTCATCAGAAAGAGTGTGGCCA-TCTTCCAGCTGCTTGCC 29349477 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || |||||||| || || || |||||| ||| Sbjct 29349476 TGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 29349417 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | | ||| | | |||| |||||| || Sbjct 29349416 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGATGATGATCTTGCTGGTCAGGGT 29349357 Query 133643 TTTTACGAAAATCTGCAT 133660 || | ||| |||||||| Sbjct 29349356 CTTCATGAAGATCTGCAT 29349339 >seq6 Length=77573801 Score = 100 bits (110), Expect = 3e-16 Identities = 141/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || |||||||| | ||| | || || |||||||| || Sbjct 46134199 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCCAGCTGCTTACCT 46134258 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || ||||||| ||||||||| || ||| |||| || || || |||||| ||| Sbjct 46134259 GCAACGATGAGCCTCTGCTGGTCAGG-GGGGTGCCCTCTTTATCCTGGATCTTGGCCTTC 46134317 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| |||||||||| || | ||| | ||| |||| |||||| || Sbjct 46134318 ACATTTTCAATAGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCAGGTCAGGGTC 46134377 Query 133644 TTTACGAAAATCTGCAT 133660 || | ||| |||||||| Sbjct 46134378 TTCAGGAAGATCTGCAT 46134394 >seq1 Length=122678785 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 133468 ACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCG 133526 |||||||||| || |||||||| | || | | | || || |||| |||||| || Sbjct 93617934 ACTCTTTCTGGATGTTGTAATCAGAAAGGATGCGGCCA-TCTTCCAGCTTCTTGCCTGCA 93617992 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | ||||||| ||||||||| |||||||||||| | || || |||||| ||| | Sbjct 93617993 AAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATCTTGGCCTTCACA 93618052 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | || ||||| ||||||| || || | | ||| ||| |||| || ||| || || Sbjct 93618053 TTTTCGTTGGTGTCACTGGGCTCAACCTCCAGGATGATGGTATTGCAGGCCAGGGTCTTC 93618112 Query 133647 ACGAAAATCTGCAT 133660 | ||| |||||||| Sbjct 93618113 ATGAATATCTGCAT 93618126 >seq39 Length=123869142 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||| || || || | | | ||||| || |||||||| Sbjct 84745765 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCA-TCCTCCAGTTGCTTGCC 84745707 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || | |||||| || |||||||| |||||||| || ||||| ||| Sbjct 84745706 CGCAAATATCAGTCTCTGCTGATCAGGAGGGATTCCTTCCTTATCCAGAATCTTGGCCTT 84745647 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | || | || || | |||||| || |||| |||| ||| || || || || || Sbjct 84745646 TTCATTTTCTATTGTATCCGAGGGCTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGT 84745587 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 84745586 CTTAACGAAAATCTGCAT 84745569 >seq9 Length=61074082 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| |||||| | || || ||| | || || ||| Sbjct 1878783 AAGTGCAGGGTGGACTCTTTCTGGATATTGCAGTCTGACAGAGTGTAGCCATCTTCCAGC 1878842 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || | ||| || |||| || ||||| |||| || |||| |||||||| || ||| Sbjct 1878843 TGTTCGCCTGCAAAAATCAGATGCTGCAGGTCAGGCAGGAT-CCTTCCTTATCTTGGAT- 1878900 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || |||| | ||||| ||||| ||| | || || || | || || ||| || || Sbjct 1878901 TTTGGCTTTGACATTCTCAATGGTGTCAGTGAGATCGACCTCCAGGGGGATGGTCTTTCC 1878960 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| | || || |||| | |||||| Sbjct 1878961 TGTCTGGGTCTTCTCGAAGACCTGCAT 1878987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483401052260320