Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq1 192 7e-44
seq33 185 1e-41
>seq1
Length=122678785
Score = 192 bits (212), Expect = 7e-44
Identities = 604/930 (65%), Gaps = 13/930 (1%)
Strand=Plus/Plus
Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118
|||||| ||||| | |||| ||| |||| |||||||| || || | ||| ||
Sbjct 81989604 CCAGGGCTTTATGCCTCAGATGCTCATCTAAACACTGGATGGCAAAGAGGTCAATGTCTG 81989663
Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178
|| |||||||| || |||| ||| ||| | | | | ||||| || | || || |
Sbjct 81989664 TGTCAAACTTGTTGGCAAACAAGTGGTGCTTG--CGT-AGCATCCAGTTCAAGTCACCTG 81989720
Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238
|||||| || ||||| || ||||| || || || |||||||| || || |||| || |
Sbjct 81989721 CTCCGAAAACACACACAGAACGCACATGGACCCCACTGCACGGTGGGTAGGGGGCACCCT 81989780
Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298
||||| || || |||| ||||| || || ||||| | ||| || |||||||| |
Sbjct 81989781 TAGAGACATCACCTTCAAAGTACTGCCATTTGACAAACCTTGCGATTGCATGCATGTCAG 81989840
Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358
| |||| ||||| | | | | || | || || || | || | ||||| | ||
Sbjct 81989841 ACATGTCATACTTCTGGCTTAAGGACAGCGAGCCTGGGACTTCAGGGATCCTCTGAATAG 81989900
Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418
| ||||| |||| || || || || || || || || | ||||||||| |||| ||
Sbjct 81989901 TGGCCCAGAGGTACTCATCAGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGGA 81989960
Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478
||| || | ||| | || || || ||| | || | ||| || || || |
Sbjct 81989961 TTTTTTCATTCTTTAGCACATATTCTACATACTTCCTACTGACCACAAAATAAGCACTGC 81990020
Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538
| ||||| | ||| | | ||| || || |||||| || |||||| | |
Sbjct 81990021 CTGAAAATAGAGGTGTTTCAAGAGGTGGATGCATTTTGTCAGTCCCTGTGTTGGTCAGCT 81990080
Query 162539 TTCCCTCTACGACC---ACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGT 162595
|||| | || || | || ||| ||||||| | | || ||| | |
Sbjct 81990081 TTCCATTAACAACTGTAAAATG---CTTTTTCCACCTTTCTTTTTTGTTGGATGGCATTC 81990137
Query 162596 GTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGAT 162655
|| || ||||| |||| |||| | | || |||| || || || || | |
Sbjct 81990138 TCTCAGTTTCTAGGTTGTTTTCACCCATTAGCGATTTGAGCTTCCGGACAATTTCCAAGT 81990197
Query 162656 TGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGA 162715
|||| || | ||||| || |||| || ||||| || | || ||||| | | || |
Sbjct 81990198 TGGTTTTGATAGGAAAATCCATGCCACAAAGATTTATCAAGTACTTCCAGTCTGCACTCA 81990257
Query 162716 GTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACA 162775
| | || ||||| | ||||| || || ||||| || |||||||| || || || |
Sbjct 81990258 TCCTATGGAGGTCCTGCATGCAGTTGAGGTCAGCCTGAACTCGACTCCATGAGGCATATA 81990317
Query 162776 CGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCA 162835
| || ||||| | | | |||| || |||| || ||| || || | || || | ||
Sbjct 81990318 CCACACTCTCTAGCTGACTGGCCACGAAGATGTTACTGAAGCAGGACGCAATGCCAAGCA 81990377
Query 162836 CGGCCAGTGAGAAC--ATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTG 162893
|||| |||| ||| || | ||| | || ||||| | |||||| | ||||||
Sbjct 81990378 CGGCAGCCAAGAAGGAATCC--TCGGATTTTTTGTCCACGTGAATGCAGTAGAAATTCTG 81990435
Query 162894 AGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGAT 162953
||| ||||||||||||||| | || || | |||||| || || || || || || ||
Sbjct 81990436 AGGCATGTAGATGGCCCTCAGGAGCCTGTCAAGCATCTCAATTTTGTGATGAACTACTAT 81990495
Query 162954 AGAATACGCTATGGGGAACTCAGCCTCCTC 162983
|||||| |||||||| || || || || ||
Sbjct 81990496 AGAATATGCTATGGGAAATTCTGCTTCTTC 81990525
>seq33
Length=31377067
Score = 185 bits (204), Expect = 1e-41
Identities = 234/322 (73%), Gaps = 0/322 (0%)
Strand=Plus/Minus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
|| |||| || || |||| | ||||| || || || || |||||||| || || | |
Sbjct 16880482 CAGAGAGGGTGAGGCAGGCTGTTCCCGAGATCTTCCCAGAACCAAAAGTGTTGAAGAGGC 16880423
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|| | |||| ||||| ||||||| |||||| ||||| || || | || || || |||
Sbjct 16880422 ACTTGTAACACCCTTCATCCTCCAGGGTGGTATTCCAGAAGGTAATGGTTGAGTTCTTGA 16880363
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
| | || || || | || | | ||||||||| | ||||||||| || || || ||||
Sbjct 16880362 GCTCCAGCTGGGTGACATTTATCTTGTCCTTGTAGGCAGGCTGGACCACGACCCCATGAT 16880303
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
||| |||||| ||| |||||||||| ||||| || ||| | || ||||| || ||||
Sbjct 16880302 TCTTGCTGAAGGTGACCATGTTTTCCAGGCTCACAGGCTTGACTTTTTGCCATGTCACTA 16880243
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070
| || ||||| | | |||| |||||||||||||| ||||| ||||| |||| |
Sbjct 16880242 TCAAGACTTCCTCGGGATTTTGCAGAGAGCATCTTAAGGAAGCGGGTGTATTCAGCAGCC 16880183
Query 172071 CCCTTTCGTCTTGCGTTACCAC 172092
|||||||||| || |||||
Sbjct 16880182 TTTTTTCGTCTTGGGTCACCAC 16880161
Score = 100 bits (110), Expect = 3e-16
Identities = 174/251 (69%), Gaps = 9/251 (4%)
Strand=Plus/Minus
Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562
||||| || |||| | || || ||||||| ||| | || | ||| | ||| ||||
Sbjct 16883203 ACAGTCTGCCTGAGGCTGGTCACTGTCCCCAGGTGCAGAACCTGGCAAACCACTTCCT-- 16883146
Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622
| |||||||| || || |||||||| || || || | ||| | || ||||| |||||
Sbjct 16883145 -TCCCCACTTGTCTCTTGGGATCTTTGACGTGGAGGACGCTTATGACTGATGTGGTCCCA 16883087
Query 171623 TTACGATGTA---GAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAA 171679
|| | || | |||| | |||||| ||||| || || || || || || |||||
Sbjct 16883086 TTGGGGTGCAAGAGAACC---TCAGTACTGTTTTCAATCCCTGACCCAGCGACCTTCCAG 16883030
Query 171680 AATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTAATCCATCTTCGAAG 171739
| || ||||| ||||| | ||| | ||| |||| || || |||| |||||||||
Sbjct 16883029 GAGATCACAGGTGCTGGGCGGGCATTGGCAAAGCACGTGATATTTAGCTGGTCTTCGAAG 16882970
Query 171740 AACTCATAGTG 171750
|| | |||||
Sbjct 16882969 AAGTTGTAGTG 16882959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578408371052800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |