Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq37 116 1e-22 seq25 113 1e-21 seq33 100 9e-18 seq26 100 9e-18 seq20 100 9e-18 seq22 98.7 3e-17 seq18 98.7 3e-17 seq35 96.9 1e-16 >seq37 Length=30902991 Score = 116 bits (128), Expect = 1e-22 Identities = 69/72 (96%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 29978030 GCTGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 29978089 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 29978090 CCGGGTTTCAGC 29978101 >seq25 Length=51628933 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 37618218 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 37618159 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 37618158 CCGGGTTTCAGC 37618147 >seq33 Length=31377067 Score = 100 bits (110), Expect = 9e-18 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 12221387 GCTGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 12221446 Query 2829 CCGGGCTT 2836 | ||| || Sbjct 12221447 CTGGGTTT 12221454 >seq26 Length=38964690 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 4998183 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 4998242 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 4998243 CCCGGGTTTCGGC 4998255 >seq20 Length=58134056 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 57449230 GGCCGAGGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 57449289 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 57449290 CCCGGGTTTCGGC 57449302 >seq22 Length=61439934 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 45354683 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 45354624 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 45354623 CCGGGTTTCGGC 45354612 >seq18 Length=55844845 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 37195015 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 37195074 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 37195075 CCGGGTTTCGGC 37195086 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 37200970 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 37201029 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 37201030 CCGGGTTTCGGC 37201041 >seq35 Length=26524999 Score = 96.9 bits (106), Expect = 1e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| || |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 25816216 GGCCGAGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 25816275 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 25816276 CCCGGGTTTCGGC 25816288 Score = 96.9 bits (106), Expect = 1e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| || |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 25816902 GGCCGAGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 25816843 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 25816842 CCCGGGTTTCGGC 25816830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849033475860