Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq33 248 1e-60
seq19 163 3e-35
seq7 158 1e-33
seq39 136 5e-27
seq20 105 8e-18
>seq33
Length=31377067
Score = 248 bits (274), Expect = 1e-60
Identities = 247/320 (77%), Gaps = 0/320 (0%)
Strand=Plus/Plus
Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131
||||||||||| || || | ||||||||| || || || ||| | | |||||| |||
Sbjct 16880161 GTGGTGACCCAAGACGAAAAAAGGCTGCTGAATACACCCGCTTCCTTAAGATGCTCTCTG 16880220
Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191
|| | | | |||| || |||| || || ||||| ||| ||||||| | | ||
Sbjct 16880221 CAAAATCCCGAGGAAGTCTTGATAGTGACATGGCAAAAAGTCAAGCCTGTGAGCCTGGAA 16880280
Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251
|||||| | || || ||||| | || ||||| ||||||||||| || || |||||||||
Sbjct 16880281 AACATGGTCACCTTCAGCAAGAATCATGGGGTCGTGGTCCAGCCTGCCTACAAGGACAAG 16880340
Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311
||||| |||||||||| | ||| | ||||||||||| || || |||||||||||| |
Sbjct 16880341 ATAAATGTCACCCAGCTGGAGCTCAAGAACTCAACCATTACCTTCTGGAATACCACCCTG 16880400
Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371
||||| || ||||| ||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct 16880401 GAGGATGAAGGGTGTTACAAGTGCCTCTTCAACACTTTTGGTTCTGGGAAGATCTCGGGA 16880460
Query 171372 GTGGCCTGCCTCACCCTCTC 171391
|||||||||||||||||
Sbjct 16880461 ACAGCCTGCCTCACCCTCTC 16880480
Score = 165 bits (182), Expect = 1e-35
Identities = 199/271 (73%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447
|| | || |||||||| |||||||| || || || || || || ||||| || || ||||
Sbjct 16882933 TCCCAGTACAGCCCACAGTGTTTCTTCACTACAACTTCTTCGAAGACCAGCTAAATATCA 16882992
Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507
| || | ||||||||||||||| ||||| ||| | |||||| | | ||||||| |
Sbjct 16882993 CGTGCTTTGCCAATGCCCGCCCAGCACCTGTGATCTCCTGGAAGGTCGCTGGGTCAGGGA 16883052
Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567
|||||||||||| |||||||| | || | ||||| || || || || | || || |
Sbjct 16883053 TTGAAAACAGTACTGAGGTTCTCTTGCACCCCAATGGGACCACATCAGTCATAAGCGTCC 16883112
Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627
|||| || ||||| |||||||| || |||| ||||| || | ||||| || |||||
Sbjct 16883113 TCCACGTCAAAGATCCCAAGAGACAAGTGGGGAAGGAAGTGGTTTGCCAGGTTCTGCACC 16883172
Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGT 171658
|||| | || || | | | ||| | |||||
Sbjct 16883173 TGGGGACAGTGACCAGCCTCAGGCAGACTGT 16883203
>seq19
Length=53741614
Score = 163 bits (180), Expect = 3e-35
Identities = 218/303 (72%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
|||||||| ||||||||||| ||||| || | ||| || | || || | || ||
Sbjct 21178168 GCCCCAAAATGCCTCCACTGAAAGCCATAAATTGGGCCTAAATCCCCTTCTTCTCGGTTG 21178109
Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402
| ||| ||| | | | ||| || | ||||| | ||| |||||||| |||||||
Sbjct 21178108 GCGAATCCCAGGCTGTCCAAAAAGTCTCGAGACCCATTGGCATCCCAGATTTTCACTCCC 21178049
Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAA 147462
||| || || ||||||| || ||||| ||| ||| ||||| |||| ||||||||||
Sbjct 21178048 CTGGAAGACAGTTCCTTAGCGTTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAA 21177989
Query 147463 ACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGTCCCTCAGCGAATAC 147522
|| ||| ||||||| || | ||||| |||||||| || || | || ||||| ||
Sbjct 21177988 ACACCCTTCCAAAATACACGTTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAG 21177929
Query 147523 CTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTCCTCCCTGCGCGTC 147582
| |||||| || ||||| |||||||||||||||||||| | ||| | | | || | |
Sbjct 21177928 CGCGCCTGCATGCCGAACACCGACAGCGTGCCCGTGCCCGTGCGGTCGTGCTTCCGGGCC 21177869
Query 147583 CCG 147585
|||
Sbjct 21177868 CCG 21177866
>seq7
Length=80974532
Score = 158 bits (174), Expect = 1e-33
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || | ||| || | ||||||||||||||| | ||||||||| ||||||||
Sbjct 67495363 CTTCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 67495304
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
||| || ||||| |||||||| || ||||||||||| |||||||| || ||||| ||||
Sbjct 67495303 GGGCACGCCCAGCCCCATGTCTCCTGACCTCTGGTATAGCTGGCAGGACAGCTCACCGTT 67495244
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
|||| || |||||||| ||| |||||||| || || |||||
Sbjct 67495243 CACCACATAGAACTGGCAGAGGGCATGGCACGGAGGTAGGGCCAT 67495199
Score = 138 bits (152), Expect = 1e-27
Identities = 131/170 (77%), Gaps = 12/170 (7%)
Strand=Plus/Minus
Query 178228 TTAAGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGG 178287
|| || ||||| |||||||||| ||| |||| |||||||| |||||||||||||||||||
Sbjct 5935739 TTTAGAGTTACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGG 5935680
Query 178288 TGATGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAA 178347
||||||| | ||| ||||| ||| | ||| ||||| ||| | || || |
Sbjct 5935679 TGATGCCCCGGGCTGAGAACCAC------------GACCCAGACATCAAGAACCACGTGA 5935632
Query 178348 ACTCTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397
|||| ||||| || ||||| |||||||| || |||||||||| || |||
Sbjct 5935631 ACTCCCTGGGAGAGAAGCTCAAGACCCTCAGGCTGAGGCTGCGACGCTGT 5935582
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521
|||| || || || ||||| |||||||| |||||||||||||| || || || |||||||
Sbjct 5933580 AGCTCCAGGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5933521
Query 178522 TAGAAGCTTACATGACAA 178539
||||| | ||||||||||
Sbjct 5933520 TAGAAACCTACATGACAA 5933503
>seq39
Length=123869142
Score = 136 bits (150), Expect = 5e-27
Identities = 137/174 (79%), Gaps = 3/174 (2%)
Strand=Plus/Minus
Query 146907 CAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG 146966
|||||| |||||||| ||||| | ||| || ||||| | ||||| || |||| || |
Sbjct 113736672 CAGCTGTATTTTCAGCGGCTCAATGTGATTCAGGTAAATATGCGCATCTCCCAAAGTATA 113736613
Query 146967 CACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA-GCG-AG 147024
| ||||| | ||||| ||||| ||| ||| || | |||||||||||||| ||| ||
Sbjct 113736612 TATGAAGTCACTTGGCTTCAGGCCTGTCTTGTGTGCAATCATGTAGGTGAGCAGGCGTAG 113736553
Query 147025 -TAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTA 147077
|||||||| ||||||||||| || ||||| |||||||| || |||||||||||
Sbjct 113736552 CTAGCTGGCGATGTTGAAGGGCACGCCCAGCCCCATGTCTCCTGACCTCTGGTA 113736499
>seq20
Length=58134056
Score = 105 bits (116), Expect = 8e-18
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
||| || |||||||| | |||| || | ||||| ||||||| |||| ||||||||
Sbjct 42424928 GTATTCCCTGGTGTTCATCATTGGCCTGGTCGGCAACATCCTGGTGCTCCTGGTCCTCAT 42424987
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
| |||| |||||||| || |||||||| ||||| ||| ||||||||||| | ||
Sbjct 42424988 GCAATACAGGAGGCTCAAGAGCATGACCAGCATCTACCTTCTCAACCTGGCCATATCGGA 42425047
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGAT 8762
|||||| | | ||||| || ||||| |||||
Sbjct 42425048 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGAT 42425080
Score = 102 bits (112), Expect = 1e-16
Identities = 197/288 (68%), Gaps = 6/288 (2%)
Strand=Plus/Minus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
||| || |||||||| || |||| || | ||||||| ||||| | | ||||||
Sbjct 42384083 GTATTCCCTGGTGTTCGTGATTGGTCTGCTGGGCAATGTGGTGGTGGTGGTGATCCTCAC 42384024
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
||| |||||||| ||| |||| ||||| |||||||||||| |||| ||||| || |||
Sbjct 42384023 AAAATACAAGAGACTCTGGATTATGACTAACATCTTCCTGCTCAATTTGGCCATTTCTGA 42383964
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789
| |||| | | ||||| || || |||||||| || ||| || |||| |||
Sbjct 42383963 CTTGCTCTTTCTATTCACTCTGGTATTCTGGATTCA-TTATACT-GGATGGAATGATTGG 42383906
Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849
|| |||| | |||||||||| | || || |||| || ||| | ||
Sbjct 42383905 GTTTTTGGCCGTTC----CATGTGTAAGCTCATCTCTGGGCTTTATTACTTGGGCTTATA 42383850
Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGC 8897
| | || || | || ||||||||| |||| | ||| |||| || ||
Sbjct 42383849 CGGTGAGATCTTTTTCATCATCCTGCTGACCATAGACCGGTACCTGGC 42383802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583464164515200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |