Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq7 114 2e-20 >seq7 Length=80974532 Score = 114 bits (126), Expect = 2e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 214001 ATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAA 214060 ||||| || || || || |||||||||||||| || | | || | ||| | ||| | Sbjct 19671577 ATTGATGGAGAGGTGTATCCTCCTACCGTCAAAGATACTCAGGTCGAGATGATCTACCCA 19671518 Query 214061 CCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCC 214120 || ||||| ||| | | | || || |||| | ||| | ||||| || ||||| Sbjct 19671517 CCTCATGTTCCTGAACACCTGCAGTTTGCTGTGGGCCAGGAGGTCTTTGGTCTGGTGCCT 19671458 Query 214121 GGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTG 214180 ||| | ||| |||| |||| || |||||| | ||||| ||||| || || || ||||| Sbjct 19671457 GGTCTGATGATGTATGCCACCATTTGGCTGCGGGAGCATAACAGAGTGTGTGATGTGCTT 19671398 Query 214181 AAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 ||||| |||||||| |||||| | || || | | | ||||||| Sbjct 19671397 AAACAGGAGCACCCAGAATGGGATGATGAGCGGTTATTCCAGA 19671355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723311251528320