Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq39 96.9 3e-15
seq7 93.3 3e-14
>seq39
Length=123869142
Score = 96.9 bits (106), Expect = 3e-15
Identities = 128/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 111697 AGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGG 111756
||||||| || | |||| |||||||| | |||| |||||||||||| | | ||
Sbjct 113736671 AGCTGTATTTTCAGCGGCTCAATGTGATTCAGGTAAATATGCGCATCTCCCAAAGTATAT 113736612
Query 111757 ATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAA 111816
|| || || | |||| || || || |||||||||||||||| ||||| || | |||
Sbjct 113736611 ATGAAGTCACTTGGCTTCAGGCCTGTCTTGTGTGCAATCATGTAGGTGAGCAGGC-GTAG 113736553
Query 111817 CTA----GCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATA 111868
||| || ||||| || ||||| || || ||||| ||||| || || || ||||
Sbjct 113736552 CTAGCTGGCGATGTTGAAGGGCACGCCCAGCCCCATGTCTCCTGACCTCTGGTATA 113736497
>seq7
Length=80974532
Score = 93.3 bits (102), Expect = 3e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| ||||||||||| |||||||| ||||| || ||| || || ||||| || |||||
Sbjct 67495356 CCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACG 67495297
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897
|| || ||||| ||||| || || || |||||||| || || || | | | ||||
Sbjct 67495296 CCCAGCCCCATGTCTCCTGACCTCTGGTATAGCTGGCAGGACAGCTCACCGTTCACCACA 67495237
Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|| || || || || |||| || ||||| | ||||||
Sbjct 67495236 TAGAACTGGCAGAGGGCATGGCACGGAGGTAGGGCCATC 67495198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391929989296684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |