Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq39 96.9 3e-15 seq7 93.3 3e-14 >seq39 Length=123869142 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 111697 AGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGG 111756 ||||||| || | |||| |||||||| | |||| |||||||||||| | | || Sbjct 113736671 AGCTGTATTTTCAGCGGCTCAATGTGATTCAGGTAAATATGCGCATCTCCCAAAGTATAT 113736612 Query 111757 ATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAA 111816 || || || | |||| || || || |||||||||||||||| ||||| || | ||| Sbjct 113736611 ATGAAGTCACTTGGCTTCAGGCCTGTCTTGTGTGCAATCATGTAGGTGAGCAGGC-GTAG 113736553 Query 111817 CTA----GCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATA 111868 ||| || ||||| || ||||| || || ||||| ||||| || || || |||| Sbjct 113736552 CTAGCTGGCGATGTTGAAGGGCACGCCCAGCCCCATGTCTCCTGACCTCTGGTATA 113736497 >seq7 Length=80974532 Score = 93.3 bits (102), Expect = 3e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || ||||||||||| |||||||| ||||| || ||| || || ||||| || ||||| Sbjct 67495356 CCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACG 67495297 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || || ||||| ||||| || || || |||||||| || || || | | | |||| Sbjct 67495296 CCCAGCCCCATGTCTCCTGACCTCTGGTATAGCTGGCAGGACAGCTCACCGTTCACCACA 67495237 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || || || |||| || ||||| | |||||| Sbjct 67495236 TAGAACTGGCAGAGGGCATGGCACGGAGGTAGGGCCATC 67495198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391929989296684