Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 1e-21
>seq1
Length=122678785
Score = 118 bits (130), Expect = 1e-21
Identities = 243/359 (68%), Gaps = 12/359 (3%)
Strand=Plus/Minus
Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742
||||| | || |||||||| || || || || || | || ||||| || |||||| |
Sbjct 81990525 GAAGAAGCAGAATTTCCCATAGCATATTCTATAGTAGTTCATCACAAAATTGAGATGCTT 81990466
Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802
|| | |||||||||||||||||| || ||||| |||||||| | |||||||||
Sbjct 81990465 GACAGGCTCCTGAGGGCCATCTACATGCCTCAGAATTTCTACTGCATTCACGTGGACAAA 81990406
Query 13803 AAGTCCGGCGACGAGTTCATCCGGGGCGT-CTCGGCCATCGCCAGGTGCTTCCCTAACGT 13861
|| |||| || ||| | | ||| || || ||| || |||||| |||| |
Sbjct 81990405 AAATCCGAGGATTCCTTCTTGGCTGCCGTGCTTGG-CATTGCGTCCTGCTTCAGTAACAT 81990347
Query 13862 GGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGA 13921
| ||||| | ||| | ||||| || | ||| |||||||| || ||||| ||
Sbjct 81990346 CTTCGTGGCCAGTCAGCTAGAGAGTGTGGTATATGCCTCATGGAGTCGAGTTCAGGCTGA 81990287
Query 13922 CCTCAGCTGCATGTCGGACCT-----GGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTC 13976
||||| ||||||| |||||| ||| | | | | |||| |||| || |
Sbjct 81990286 CCTCAACTGCATGCAGGACCTCCATAGGATGAGT-----GCAGACTGGAAGTACTTGATA 81990232
Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAA 14035
|| || || || ||||| || || |||| |||||| |||| || || ||| ||| ||
Sbjct 81990231 AATCTTTGTGGCATGGATTTTCCTATCAAAACCAACTTGGAAATTGTCCGGAAGCTCAA 81990173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658712290503680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |