Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=122678785 Score = 118 bits (130), Expect = 1e-21 Identities = 243/359 (68%), Gaps = 12/359 (3%) Strand=Plus/Minus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742 ||||| | || |||||||| || || || || || | || ||||| || |||||| | Sbjct 81990525 GAAGAAGCAGAATTTCCCATAGCATATTCTATAGTAGTTCATCACAAAATTGAGATGCTT 81990466 Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802 || | |||||||||||||||||| || ||||| |||||||| | ||||||||| Sbjct 81990465 GACAGGCTCCTGAGGGCCATCTACATGCCTCAGAATTTCTACTGCATTCACGTGGACAAA 81990406 Query 13803 AAGTCCGGCGACGAGTTCATCCGGGGCGT-CTCGGCCATCGCCAGGTGCTTCCCTAACGT 13861 || |||| || ||| | | ||| || || ||| || |||||| |||| | Sbjct 81990405 AAATCCGAGGATTCCTTCTTGGCTGCCGTGCTTGG-CATTGCGTCCTGCTTCAGTAACAT 81990347 Query 13862 GGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGA 13921 | ||||| | ||| | ||||| || | ||| |||||||| || ||||| || Sbjct 81990346 CTTCGTGGCCAGTCAGCTAGAGAGTGTGGTATATGCCTCATGGAGTCGAGTTCAGGCTGA 81990287 Query 13922 CCTCAGCTGCATGTCGGACCT-----GGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTC 13976 ||||| ||||||| |||||| ||| | | | | |||| |||| || | Sbjct 81990286 CCTCAACTGCATGCAGGACCTCCATAGGATGAGT-----GCAGACTGGAAGTACTTGATA 81990232 Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAA 14035 || || || || ||||| || || |||| |||||| |||| || || ||| ||| || Sbjct 81990231 AATCTTTGTGGCATGGATTTTCCTATCAAAACCAACTTGGAAATTGTCCGGAAGCTCAA 81990173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658712290503680