Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq26 118 7e-22
seq4 113 3e-20
>seq26
Length=38964690
Score = 118 bits (130), Expect = 7e-22
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
|||| ||||| || ||||| |||||| || ||||| || || || || || ||| |
Sbjct 5008482 CGCAGGACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 5008423
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
||||| || ||||| |||||||| || || | ||| ||||| || || | |||||||||
Sbjct 5008422 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 5008363
Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670
|| |||| || | |||||| | || ||||| | |||||| |||| ||| ||
Sbjct 5008362 TCCTGGATC-TTCGCCTTAACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 5008304
Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| ||||| || || || ||||| || |||||||||
Sbjct 5008303 GGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 5008267
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || || | |||| || |||||| |||||| || ||||| || || ||
Sbjct 5007811 GCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 5007752
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 5007751 CAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 5007692
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| | |||||
Sbjct 5007691 GATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 5007633
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| |||| ||| || || ||||| || || || ||||| || |||||||||
Sbjct 5007632 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 5007583
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || || | |||| || |||||| |||||| || ||||| || || ||
Sbjct 5008039 GCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 5007980
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 5007979 CAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 5007920
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| | |||||
Sbjct 5007919 GATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 5007861
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| |||| ||| || || ||||| || || || ||||| || |||||||||
Sbjct 5007860 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 5007811
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || || | |||| || |||||| |||||| || ||||| || || ||
Sbjct 5008267 GCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 5008208
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 5008207 CAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 5008148
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| | |||||
Sbjct 5008147 GATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 5008089
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| |||| ||| || || ||||| || || || ||||| || |||||||||
Sbjct 5008088 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 5008039
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || || | |||| || |||||| |||||| || ||||| || || ||
Sbjct 5007583 GCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 5007524
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 5007523 CAGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 5007464
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| | |||||
Sbjct 5007463 GATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 5007405
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| ||| || || ||||| || || || ||||| || ||||||||
Sbjct 5007404 CCTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5007356
>seq4
Length=88276631
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| |||| || || | |||||| || | ||| ||| || || || || || |||||
Sbjct 70238970 GCCACCTCGCAGGCGAAGCACCAAGTGCAAGGTGGACTCTTTCTGGATATTGTAGTCTGA 70238911
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| ||||| | ||||| || ||||| || ||||| || | |||||| ||||| |||||
Sbjct 70238910 CAGAGTTCGGCCATCTTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGG 70238851
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| ||| ||| | ||| || | ||| ||||| | ||| |
Sbjct 70238850 GATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCGA 70238792
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | ||| || ||||| || || | || |||||||| ||||||||
Sbjct 70238791 CCTCAAGGGTGATAGTTTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 70238743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314717064713444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |