Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 1e-20
seq4 113 4e-20
seq1 111 1e-19
seq26 105 6e-18
seq5 91.5 1e-13
>seq7
Length=80974532
Score = 114 bits (126), Expect = 1e-20
Identities = 164/230 (71%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||| | ||||| || || |||| ||||| |||| || ||||| || || ||
Sbjct 43111434 ATGCAGCTCTTTGTGAAGACCCTGATGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGT 43111375
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | | ||| | |||||| ||||| ||||||||||| ||||| ||||| || ||
Sbjct 43111374 GACACCACTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCTGACCAG 43111315
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || |||||||| | ||||| | || | || || |||||
Sbjct 43111314 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAAT 43111255
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| ||| || ||||| ||||| || ||||| | || |||| ||||||||
Sbjct 43111254 A-TCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGCAT 43111206
>seq4
Length=88276631
Score = 113 bits (124), Expect = 4e-20
Identities = 162/227 (71%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || ||||| || ||||| ||
Sbjct 13711231 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACTCTGGAGGTGGAGCCCAGT 13711290
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| |||||| || || ||||| ||||| ||||| || || || ||
Sbjct 13711291 GACACCATCGAGAATGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCC-CCTGACCAG 13711349
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||||||||| ||||||| | ||| | |||| ||||||
Sbjct 13711350 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGCCCGACTACAAC 13711409
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||| || || | || ||||| |||| ||| |||| ||
Sbjct 13711410 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 13711456
>seq1
Length=122678785
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || || || || ||||| ||
Sbjct 14875398 CATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 14875339
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| |||||| || || ||||| ||||| ||||| || || || ||
Sbjct 14875338 TGACACCATCGAGAATGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCA 14875279
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| | ||||| | | ||| | ||||| |||||
Sbjct 14875278 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGGTGCACCCTGTCCGACTACAA 14875219
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202
||| || |||||||| || | || ||||| ||||
Sbjct 14875218 CATCCAGAAGGAGTCCACTCTGCACTTGGTCCTGCG 14875183
>seq26
Length=38964690
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || || || || ||||| ||
Sbjct 5008267 CATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 5008326
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| || || || || || ||||| || ||||| || || || ||
Sbjct 5008327 TGACACCATCGAGAACGTTAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 5008386
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| ||||||| | ||| | ||||| |||||
Sbjct 5008387 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAA 5008446
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| || |||||||| || | || ||||| |||| ||| |||| ||
Sbjct 5008447 CATCCAGAAGGAGTCTACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 5008494
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || || || || ||||| ||
Sbjct 5007583 CATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 5007642
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || ||||| || || || ||
Sbjct 5007643 TGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 5007702
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| ||||||| | ||| | ||||| |||||
Sbjct 5007703 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAA 5007762
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| || | || |||| | || | |||| |||||
Sbjct 5007763 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGGGGGGGCAT 5007813
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || || || || ||||| ||
Sbjct 5007811 CATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 5007870
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || ||||| || || || ||
Sbjct 5007871 TGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 5007930
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| ||||||| | ||| | ||||| |||||
Sbjct 5007931 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAA 5007990
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| || | || |||| | || | |||| |||||
Sbjct 5007991 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGGGGGGGCAT 5008041
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || || || || ||||| ||
Sbjct 5008039 CATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 5008098
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || ||||| || || || ||
Sbjct 5008099 TGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 5008158
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| ||||||| | ||| | ||||| |||||
Sbjct 5008159 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAA 5008218
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| || | || |||| | || | |||| |||||
Sbjct 5008219 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGGGGGGGCAT 5008269
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| || ||| | || || || || ||||| ||
Sbjct 5007356 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 5007415
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| ||||| || || || ||||| || ||||| || || || ||
Sbjct 5007416 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 5007475
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||||||||| ||||||| | ||| | ||||| ||||||
Sbjct 5007476 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 5007535
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | || |||| | || | |||| |||||
Sbjct 5007536 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGGGGGGGCAT 5007585
>seq5
Length=88915250
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||||||| | || || || || ||||| ||
Sbjct 39533764 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 39533705
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || || ||||| ||||| || || || ||
Sbjct 39533704 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCGCCTGACCAG 39533645
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || ||||||| | || |||| |||||||||
Sbjct 39533644 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 39533585
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || || ||||| || | || |||| |||| || ||||||||
Sbjct 39533584 ATCCAGAAAGAGTCAACTCTCCACCTGGTCCTGCGCCTGAGGGGTGGC 39533537
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||||||| | || || || || ||||| ||
Sbjct 39533992 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 39533933
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || || ||||| ||||| || || || ||
Sbjct 39533932 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCGCCTGACCAG 39533873
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || ||||||| | || |||| |||||||||
Sbjct 39533872 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 39533813
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| || | || |||| |||| || ||||||| ||
Sbjct 39533812 ATCCAGAAAGAGTCAACTCTCCACCTGGTCCTGCGCCTGAGGGGTGGTAT 39533763
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| |||||||||||| | || || || || ||||| ||
Sbjct 47887808 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 47887867
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || || ||||| ||||| || || || ||
Sbjct 47887868 GACACCATCGAAAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 47887927
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || ||||||| | || |||| |||||||||
Sbjct 47887928 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 47887987
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || || |||| || | || || || | | | || ||||||||
Sbjct 47887988 ATCCAGAAAAAGTCAACTCTCCACCTGATTCTCCATCTGAGGGGTGGC 47888035
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||| ||| || || ||||| || ||||||||| | || || || || ||||| ||
Sbjct 39534220 ATGCCGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 39534161
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || || ||||| ||||| || || || ||
Sbjct 39534160 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCGCCTGACCAG 39534101
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || ||||||| | || |||| |||||||||
Sbjct 39534100 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 39534041
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| || | || |||| |||| || ||||||| ||
Sbjct 39534040 ATCCAGAAAGAGTCAACTCTCCACCTGGTCCTGCGCCTGAGGGGTGGTAT 39533991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434900633583360
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