Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq19 232 6e-56
seq5 197 1e-45
seq1 183 3e-41
seq33 158 1e-33
seq39 113 4e-20
seq13 96.9 3e-15
>seq19
Length=53741614
Score = 232 bits (256), Expect = 6e-56
Identities = 383/550 (70%), Gaps = 7/550 (1%)
Strand=Plus/Plus
Query 2137 ACTCTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTG 2196
|| || ||||| || | || || || | || |||||||||| | || || | |||
Sbjct 16731195 ACGCTGAACTGCATCGTCGCCGTGTCCCAGAACCTGGGCATTGGCAGGAACGGGGACCTG 16731254
Query 2197 CCATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCT---TCTTCC 2253
|| ||||| || || | |||||||| || ||| |||| |||||| | || |||
Sbjct 16731255 CCCTGGCCCCCGCTCAGGAATGAATTCAAGTGTTTCCAAAGAATGACCACGAACTCCTCC 16731314
Query 2254 ACTGACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATT 2313
|| ||||||||| | || |||||||| || ||||||||||| || |||| |
Sbjct 16731315 GTGGAAGGTAAACAGAATTTGGTGATTATGGGTAGGAAGACATGGTTCTCTATTCC--TG 16731372
Query 2314 AAAAGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGC 2371
| ||| | | ||||| || ||||||| ||| | |||||||| ||| |||| || || |
Sbjct 16731373 AGAAGAATCGACCTTTAAAGGACAGAATTAATATAGTTCTCAGCAGAGACCTCAAGGAAC 16731432
Query 2372 CACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAG 2431
| |||| || ||||| ||| |||| |||||| | ||| | ||| | || |||
Sbjct 16731433 CTCCACAAGGAGCTCATTTTCTTGCCAAAAGTCTGGATGATGCTTTAAAACTTACTGAGC 16731492
Query 2432 GACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATG 2491
|||||||||| | | | ||||| | | |||||||| | || || || ||||| |||
Sbjct 16731493 AACCAGAATTAGCAAATAAAGTGGACATGGTTTGGATAGTGGGAGGCAGTTCTGTTTATA 16731552
Query 2492 AGGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAAT 2551
|||| ||| | | | | || | | | || ||| | ||||||||| |||| |||
Sbjct 16731553 AGGAAGCCATGAACAAACCAGGCCATCTTAGACTATTTGTGACAAGGATTATGCATGAAT 16731612
Query 2552 TTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAAT 2611
||||| |||| |||| |||||||||||| || | ||||| |||| || | ||||
Sbjct 16731613 TTGAAGGTGACACATTTTTCCCAGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAAT 16731672
Query 2612 TTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATAT 2671
|||||||||| |||| || || || || || || |||| ||||||||||| |||
Sbjct 16731673 ACCCAGGTGTTCTTTCTGATGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTAT 16731732
Query 2672 ATGaaaaaaa 2681
|||| || ||
Sbjct 16731733 ATGAGAAGAA 16731742
>seq5
Length=88915250
Score = 197 bits (218), Expect = 1e-45
Identities = 357/518 (69%), Gaps = 8/518 (2%)
Strand=Plus/Minus
Query 2170 ATGGGCATTGGAAACAAGGGAAAACTGCCATGGCCTCCTCTTAAAAATGAATTTAAACAT 2229
|||||||| || | || || | ||||| ||| | || || | |||||||| || ||
Sbjct 42956076 ATGGGCATCGGCAGGAACGGGGACCTGCCCTGGGCCCCGCTCAGGAATGAATTCAAGTAT 42956017
Query 2230 TTTCAAAAAATGACATCTTCTTCCACTGACTTA---AAACAGAATGTTGTAATTATGGGA 2286
|| |||| |||||| | ||| ||| | ||||||||| | | ||||||||
Sbjct 42956016 TTCCAAAGAATGACCACGAACTCCTCTGTGGAAGGTAAACAGAATTTGGCGATTATGGGT 42955957
Query 2287 AGAAAGACATGGTTTTCACTTCCCATTAAAAGCA--GGCCTTTGAACAACAGAATAAATC 2344
| ||||||||||| || |||| | | ||| | | | ||| || ||||||| |||
Sbjct 42955956 TGGAAGACATGGTTCTCTATTCC--TGAGAAGAATCGACTTTTAAAGGACAGAATTAATA 42955899
Query 2345 TGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTTGCAAAAAGTA 2404
| |||||||| ||| |||| || || || |||| || ||||| ||| |||| |||| |
Sbjct 42955898 TAGTTCTCAGCAGAGACCTCAAGGAACCTCCACAAGGAGCTCATTTTCTTGCCAAAA-TC 42955840
Query 2405 TAGATCACGCTCTGGAAATTATAATAGGACCAGAATTAAAAGACAGGGTGGATAAGATTT 2464
| ||| | ||| | || ||| |||||||||| | | | ||||| | | ||
Sbjct 42955839 TGGATGATGCTTTAAAACTTACTGAGCAACCAGAATTAGCAAATAAAGTGGACATGGATT 42955780
Query 2465 GGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTACAAGATCTTGCAAACAGATGC 2524
||||| | || || || ||||| ||| |||| ||| | | | | || | | | |
Sbjct 42955779 GGATAGTGGGAGGCAGTTCTGTTTATAAGGAAGCCATGAACAAACCAGGCCATCTTAGAC 42955720
Query 2525 TGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCAGAAATTAATC 2584
| ||| | ||||||||| |||| |||||||| |||| |||| |||||||||||| ||
Sbjct 42955719 TATTTGTGACAAGGATTATGCATGAATTTGAAAGTGACACATTTTTCCCAGAAATTGATT 42955660
Query 2585 TTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAA 2644
| ||||| |||| | | |||| |||||||||| |||| || || || || |
Sbjct 42955659 TGGAGAAATATAAACTTCCGCCAGAATACCCAGGTGTTCTTTCTGATGTCCAGGAGGAGA 42955600
Query 2645 ATGGAATTAGATACAAATTTGAGATATATGaaaaaaaa 2682
| || |||| ||||||||||| ||||||| || |||
Sbjct 42955599 AAGGCATTAAGTACAAATTTGAAGTATATGAGAAGAAA 42955562
>seq1
Length=122678785
Score = 183 bits (202), Expect = 3e-41
Identities = 295/421 (70%), Gaps = 6/421 (1%)
Strand=Plus/Minus
Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCA-- 2320
||||||||| | || |||||||| || ||||||||||| || |||| | | ||| |
Sbjct 42969810 AAACAGAATTTGGTGATTATGGGTAGGAAGACATGGTTCTCTATTCC--TGAGAAGAATC 42969753
Query 2321 GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTG 2380
| ||||| || ||||||| ||| | |||||||| ||| | | || || || |||| |
Sbjct 42969752 GACCTTTAAAGGACAGAATTAATATAGTTCTCAGCAGAGATC--AAGGAACCTCCACAAG 42969695
Query 2381 GGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAAT 2440
| |||| ||| |||| |||||| | ||| | ||| | || ||| ||||||||
Sbjct 42969694 GAACTCATTTTCTTGCCAAAAGTCTGGATGATGCTTTAAAACTTACTGAGCAACCAGAAT 42969635
Query 2441 TAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCA 2500
|| | | | ||||| | | ||||| || | | || || ||||| ||| |||| ||
Sbjct 42969634 TAGCAAATAAAGTGGACATGGTTTGGCTAGTGAGAGGCAGTTCTGTTTATAAGGAAGCCA 42969575
Query 2501 TTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTG 2560
| | | | | || | | | || ||| | ||||||||| |||| |||||||| |||
Sbjct 42969574 TGAACAAACCAGGCCATCTTAGACTATTTGTGACAAGGATTATGCATGAATTTGAAAGTG 42969515
Query 2561 ATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTG 2620
| |||| |||||||||||| || | ||||| |||| || | |||| |||||||
Sbjct 42969514 ACACATTTTTCCCAGAAATTGATTTGGAGAAATATAAACTTCTACCAGAATACCCAGGTG 42969455
Query 2621 TTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaa 2680
||| |||| || || || || || || |||| ||||||||||| ||||||| || |
Sbjct 42969454 TTCTTTCTGATGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATGAGAAGA 42969395
Query 2681 a 2681
|
Sbjct 42969394 A 42969394
Score = 132 bits (146), Expect = 4e-26
Identities = 288/431 (67%), Gaps = 4/431 (1%)
Strand=Plus/Minus
Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCAGG 2322
||||||||| | || |||||||| || ||||||||||| || |||||| || |
Sbjct 77151799 AAACAGAATTTGGTGATTATGGGTAGGAAGACATGGTTCTCTATTCCCAAGAACCACCAA 77151740
Query 2323 CCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGG 2382
||||| || ||||||| ||| | |||||||| || |||||| || || |||| ||
Sbjct 77151739 CCTTTAAAGGACAGAATTAATTTAGTTCTCAGCGGAGACCTTAGGGAACCTCCACAAGGA 77151680
Query 2383 GCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATTA 2442
|||| ||| |||| |||||| | ||| | || | || |||| | | ||||||||
Sbjct 77151679 ACTCATTTTCTTGCCAAAAGTCTGGATGATGCCTTAAAACTTATTGAACAAGCAGAATTA 77151620
Query 2443 AAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATT 2502
|| | | |||| | |||||||| | || | || | ||| ||| |||| |||
Sbjct 77151619 GAAAATAAAATGGACATAGTTTGGATAGTGGGAAGTAGTTATGTTTATAAGGAACCCATG 77151560
Query 2503 ACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGAT 2562
| | | || | | | ||| | | | ||||||| | | |||||| ||||
Sbjct 77151559 AAGAAGCCAGGCCATCTTAGGCTATCTGCGAGAAGGATTACAGAGGAGTTTGAAAGTGAC 77151500
Query 2563 ACA----TACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGG 2618
||| || || |||||||| || | ||||| |||| || | |||| ||||
Sbjct 77151499 ACATTTTTATTTGTCAGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAATACTCAGG 77151440
Query 2619 TGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaa 2678
||| | |||| |||| || ||||| || | || ||||||||||| ||||||| ||
Sbjct 77151439 TGTCCTTTCTGATATGCAGGAGGAAAAAGGCAGTAAGTACAAATTTGAAGTATATGAGAA 77151380
Query 2679 aaaaaCATAAT 2689
|| | ||||
Sbjct 77151379 GAACAATTAAT 77151369
Score = 118 bits (130), Expect = 9e-22
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||||||| | |||||||| ||||||||| | || || || |||||||||
Sbjct 13734881 GTGGTGGAGGAGCTCTTCAGGGATGGGGTGAACTGGGGGAGGATCGTGGCCTTCTTTGAG 13734940
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| ||||| || ||||||||||| |||||||| | | || | |||| || ||||||
Sbjct 13734941 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 13735000
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||| ||||||||| ||
Sbjct 13735001 ATCGCCCTGTGGATGACTGA 13735020
>seq33
Length=31377067
Score = 158 bits (174), Expect = 1e-33
Identities = 182/245 (74%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 1281 GAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAAACATGGCCACT 1340
||||| | || || |||||||||||||| || | |||| |||||||||| |||
Sbjct 16880233 GAAGTCTTGATAGTGACATGGCAAAAAGTCAAGCCTGTGAGCCTGGAAAACATGGTCACC 16880292
Query 1341 TTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAATGAACATAACT 1400
|| || || | || ||||| || || ||||| || ||||| || || || || | ||
Sbjct 16880293 TTCAGCAAGAATCATGGGGTCGTGGTCCAGCCTGCCTACAAGGACAAGATAAATGTCACC 16880352
Query 1401 GAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGGATGATGAAGGG 1460
|||| | || | ||| |||| || ||||||||||| || || |||| |||||||||
Sbjct 16880353 CAGCTGGAGCTCAAGAACTCAACCATTACCTTCTGGAATACCACCCTGGAGGATGAAGGG 16880412
Query 1461 TGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAATAGGGTGTCTA 1520
|| |||||||| | || ||||||||||| ||||||||||| || |||| || || ||
Sbjct 16880413 TGTTACAAGTGCCTCTTCAACACTTTTGGTTCTGGGAAGATCTCGGGAACAGCCTGCCTC 16880472
Query 1521 ACCCT 1525
|||||
Sbjct 16880473 ACCCT 16880477
>seq39
Length=123869142
Score = 113 bits (124), Expect = 4e-20
Identities = 129/173 (75%), Gaps = 3/173 (2%)
Strand=Plus/Minus
Query 118456 AGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGT 118515
|| || | |||||| |||||||||||||||| || | ||| ||||| || | |||| |
Sbjct 113736671 AGCTGTATTTTCAGCGGCTCAATGTGATTCAGGTAAATATGCGCATCTCCCAAAGTATAT 113736612
Query 118516 ATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAAC---TG 118572
||||| |||| || | || |||||| ||| ||||||||||| || | || |
Sbjct 113736611 ATGAAGTCACTTGGCTTCAGGCCTGTCTTGTGTGCAATCATGTAGGTGAGCAGGCGTAGC 113736552
Query 118573 TAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTA 118625
|||||||| | || || || || ||||| ||||||||| |||| ||||||||
Sbjct 113736551 TAGCTGGCGATGTTGAAGGGCACGCCCAGCCCCATGTCTCCTGACCTCTGGTA 113736499
>seq13
Length=63241923
Score = 96.9 bits (106), Expect = 3e-15
Identities = 278/422 (66%), Gaps = 7/422 (2%)
Strand=Plus/Minus
Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCAGG 2322
||||||||| |||| ||||||||||| |||||||| || | |||||| || | | |
Sbjct 60458072 AAACAGAATTTTGTGATTATGGGAAGGAAGACATGACTTGCTCTTCCCTAGAAGAACTGA 60458013
Query 2323 CCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGG 2382
| ||| || ||||||| ||| | |||||||| ||| | || | | || ||| ||
Sbjct 60458012 CTTTTAAAGGACAGAATTAATTTAGTTCTCAGGAGAAAACTCAGGGGACCTCCATAAGGA 60457953
Query 2383 GCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATTA 2442
||| | ||| | || ||||| | ||| | || | || |||| | ||||||||||
Sbjct 60457952 GCTTATTTTCTAGC-CAAAGTCTGGATTATGCCTTAAAACTTATTAACCAACCAGAATTA 60457894
Query 2443 AAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCA-T 2501
| | | | ||||| | | |||||| | | || | || ||||| ||| | || ||
Sbjct 60457893 ACAAAGAAAGTGGACATGGTTTGGACAGTGGGAGACAGTTCTGTGTATAAAGAAGCCACA 60457834
Query 2502 TACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGA 2561
||||| | || | | | || || | ||| |||| ||| ||||||| |
Sbjct 60457833 AACAAG-CCAGGCCATCTCAAACTATTGGTGACAGGGATCACGCAGGCATTTGAAAAT-- 60457777
Query 2562 TACATACTTC--CCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGT 2619
|||| ||| ||||||| | || | | ||| || | ||| | |||| ||| ||
Sbjct 60457776 AACATTTTTCTTCCAGAAAATGATTTGGAGATATAGAAGCTTCTTCCAGAATACCCAAGT 60457717
Query 2620 GTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaa 2679
|||| |||| || | || ||||| | |||| || |||||||| | ||| ||||
Sbjct 60457716 GTTCTTTCTGATGTCCGGGAGGAAAAAAGTATTAAGTAGAAATTTGAAGTGTATAAAAAG 60457657
Query 2680 aa 2681
||
Sbjct 60457656 AA 60457655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414460291907152
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