Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 145 2e-29 seq26 132 1e-25 seq4 131 4e-25 seq1 123 6e-23 seq21 113 1e-19 seq39 109 1e-18 seq31 100 7e-16 seq7 100 7e-16 seq3268 93.3 1e-13 >seq5 Length=88915250 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||||||||| || ||||| |||| |||||||| | | ||| | ||||| Sbjct 39533552 CAGGACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 39533611 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || ||||| ||||| || || || || || Sbjct 39533612 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATC 39533671 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| |||||||||||| || ||||| || | ||||| || Sbjct 39533672 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 39533731 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| |||| || || | ||| | ||||| Sbjct 39533732 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 39533764 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||||||||| || ||||| |||| |||||||| | | ||| | ||||| Sbjct 39533780 CAGGACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 39533839 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || ||||| ||||| || || || || || Sbjct 39533840 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATC 39533899 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| |||||||||||| || ||||| || | ||||| || Sbjct 39533900 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 39533959 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| |||| || || | ||| | ||||| Sbjct 39533960 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 39533992 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||||||||| || ||||| |||| |||||||| | | ||| | ||||| Sbjct 39534008 CAGGACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 39534067 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || ||||| ||||| || || || || || Sbjct 39534068 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATC 39534127 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| |||||||||||| || ||||| || | ||||| || Sbjct 39534128 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 39534187 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715 |||||| || | ||||| | ||| | |||||| Sbjct 39534188 CTTGCCGGTTAGGGTTTTCACGAAGATCGGCATTT 39534222 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 ||||||||||| || | ||| |||| |||||||| | | ||| | |||||||| ||| Sbjct 47888013 AGGTGGAGAGTTGACTTTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGC 47887954 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| || || ||||| || | || ||||| || || || || || || || |||||| Sbjct 47887953 TGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATC 47887894 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || |||||| |||||||||||| || ||||| || | ||||| |||||||| Sbjct 47887893 TTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCG 47887834 Query 225688 GTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||| ||||| | ||| | |||||||| Sbjct 47887833 GTCAGGGTTTTCACGAAGATCTGCATTTT 47887805 >seq26 Length=38964690 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| |||| || || | ||||||| Sbjct 5007567 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007508 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | | || ||||| || || || || |||||||| Sbjct 5007507 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007448 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 5007447 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5007388 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || |||||||| || || | ||| | |||||| Sbjct 5007387 TTACCCGTCAAGGTCTTCACGAAGATCTGCATT 5007355 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| |||| || || | ||||||| Sbjct 5007795 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007736 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | | || ||||| || || || || |||||||| Sbjct 5007735 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007676 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 5007675 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5007616 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | ||| | ||||| Sbjct 5007615 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5007584 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| |||| || || | ||||||| Sbjct 5008023 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5007964 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | | || ||||| || || || || |||||||| Sbjct 5007963 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5007904 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 5007903 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5007844 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | ||| | ||||| Sbjct 5007843 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5007812 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| |||| || || | ||||||| Sbjct 5008251 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 5008192 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | | || ||||| || || || || |||||||| Sbjct 5008191 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 5008132 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 5008131 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 5008072 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | ||| | ||||| Sbjct 5008071 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5008040 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| ||||| || || || |||| ||||| |||| || || | |||||| Sbjct 5008480 CAGGACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 5008421 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| | | || ||||| || || || || |||||||| Sbjct 5008420 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 5008361 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || ||||||||||| || ||||| || | ||||| || Sbjct 5008360 CTGGATCTTCGCCTTAACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 5008301 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| |||||||| || || | ||| | ||||| Sbjct 5008300 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 5008268 >seq4 Length=88276631 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | ||||||| Sbjct 13711213 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATCT 13711154 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || | || ||||| | | || ||||| || || || ||||||||||| Sbjct 13711153 TCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 13711094 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||| Sbjct 13711093 TGGATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTGATGGTC 13711034 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| | ||||| Sbjct 13711033 TTACCAGTCAAGGTCTTCACGAAGATCTGCAT 13711002 Score = 125 bits (138), Expect = 2e-23 Identities = 135/176 (77%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||| ||||| |||| |||||| || | || ||||| |||||||||||||| || || Sbjct 70238939 GTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTTCGGCCATCTTCTAGCTGTTTGCCC 70238880 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || || || || || || ||||| ||||| || || |||||||||||||| ||| || || Sbjct 70238879 GCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGAT-TTTGGCTTT 70238821 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 ||| ||| |||||||| || || || || | ||||| || |||||||||| Sbjct 70238820 GACATTTTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTTGCCCGTCA 70238765 Score = 116 bits (128), Expect = 9e-21 Identities = 155/214 (72%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| ||||||||||| || |||| ||||| |||| || || | |||||| Sbjct 13711442 CAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGCAGGGTGCGCCCATC 13711383 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| | | || ||||| || || || || || || || Sbjct 13711382 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGG-GGGATGCCCTCTTTTTC 13711324 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| || ||| ||||||||||| || ||||| || | ||||| || Sbjct 13711323 TTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 13711264 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| || ||||| || || | || | |||||| Sbjct 13711263 CTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 13711230 >seq1 Length=122678785 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| |||||||| || || |||| ||||| |||| || || | |||||| Sbjct 14875185 CAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATC 14875244 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||||||||| || || || ||||| | | || ||||| || || || || || || || Sbjct 14875245 TTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTC 14875304 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| || ||| ||||||||||| || ||||| || | ||||| || Sbjct 14875305 TTGGATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 14875364 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || ||||| || || | ||| | ||||| Sbjct 14875365 CTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 14875397 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 225512 GGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAG--TTCTCCCATCTTCTAGCTG 225569 ||||||| | ||||| |||| |||||||| | |||| | | |||||||| |||| Sbjct 93617925 GGAGAGTTAACTCTTTCTGGATGTTGTAATCAG--AAAGGATGCGGCCATCTTCCAGCTT 93617982 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || || ||||| || | || ||||| || || || ||| | || ||||||||||| Sbjct 93617983 CTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTCCTTTATCTTGGATCTT 93618042 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||||||| |||| ||||||| || || || || | |||| || |||| | Sbjct 93618043 GGCCTTCACATTTTCGTTGGTGTCACTGGGCTCAACCTCCAGGATGATGGTATTGCAGGC 93618102 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| | ||||| Sbjct 93618103 CAGGGTCTTCATGAATATCTGCAT 93618126 Score = 87.8 bits (96), Expect = 4e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||| || ||||||||||| ||||| | ||||| || | | || Sbjct 30583332 ACGAAGTCTCAACACACCATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACTGAGC 30583391 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||| || ||||| ||||| ||| |||| || || | | |||| || Sbjct 30583392 ACACCCATCTTCCAGTTGCTTGCCAGCAAAGTCCAGTCTCTGCTGATGAGAAAGAATTCC 30583451 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||| || || ||||| ||| ||| ||| | || ||||||| || || | Sbjct 30583452 TTTCTTATC-TGAATCTTGGCCTTTACATTTTCTACTGTATCTGAGGGCTCAGTCTCAAG 30583510 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| |||| | ||||| ||||| | ||||| || Sbjct 30583511 AGTGATAGTCTT-CCCGCAAGGGTTTTCATGAAAATCTGCATCTT 30583554 >seq21 Length=50858623 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||| |||||| || ||||| |||| |||| ||| | | ||| |||||| Sbjct 29349550 AGAACCAGGTAGAGAGTTGACTCTTTCTGGATGTTGTCATCAGAAAGAGTGTGGCCATCT 29349491 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 29349490 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 29349431 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||||||| || ||||| || | |||| || Sbjct 29349430 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGATGATGATC 29349371 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||| |||| || || ||||| | ||||| Sbjct 29349370 TTGCTGGTCAGGGTCTTCATGAAGATCTGCAT 29349339 >seq39 Length=123869142 Score = 109 bits (120), Expect = 1e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || ||||||| || ||||| | ||||| || | |||||| Sbjct 84745790 ACGAAGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 84745731 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || || ||||| || || || || |||| || || || || || || || Sbjct 84745730 ACGGCCATCCTCCAGTTGCTTGCCCGCAAATATCAGTCTCTGCTGATCAGGAGGGATTCC 84745671 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || | ||||| ||| || ||| || || || |||| || || || | Sbjct 84745670 TTCCTTATCCAGAATCTTGGCCTTTTCATTTTCTATTGTATCCGAGGGCTCAACCTCGAG 84745611 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||| | || || | ||| | ||||| || Sbjct 84745610 AGTGATGGTCTTCCCCGTAAGGGTCTTAACGAAAATCTGCATCTT 84745566 >seq31 Length=39895921 Score = 100 bits (110), Expect = 7e-16 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| ||||| || | || ||| ||| |||||||||||||||||||||| Sbjct 7459677 CACTTCAGTACCTGGCCCCTTATTCTGGCTGTTCTATGGGAGAATATTTTAGAGATAATG 7459618 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACA 5116 | | ||||||||| |||||||| ||||| ||| ||||| Sbjct 7459617 GCACACATGCTTTGATCATCTATGATGACTTATCCAAACA 7459578 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || || |||||||| || || || |||||||| || | |||||||| |||||||| Sbjct 7459346 GAAAATCTGTCCATCAGTGATGGAAATGACATTTGTTGGAACGTAAGCAGACACATCACC 7459405 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||| |||| | || ||||| || || | || |||||||||||| Sbjct 7459406 AGCTTGCATTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 7459454 >seq7 Length=80974532 Score = 100 bits (110), Expect = 7e-16 Identities = 130/176 (74%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||| ||||| || | |||||| || | || ||||| |||||||||||||| || || Sbjct 43111239 GTGGACTCTTTCTG-ATATTGTAGTCTGACAGAGTTCGGCCATCTTCTAGCTGTTTGCCC 43111297 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || || || || || || ||||| || || || || || ||||||||||| ||| || || Sbjct 43111298 GCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCTTTGTCTTGGAT-TTTGGCTTT 43111356 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 ||| ||| ||||||| || || || || | ||||| || |||||| ||| Sbjct 43111357 GACATTTTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATAGTTTTGCCCATCA 43111412 Score = 95.1 bits (104), Expect = 3e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || || | || ||| || |||||||||||||||||||||| Sbjct 45124620 CACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCCATGGGAGAATATTTTAGAGATAATG 45124679 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACA 5116 | ||||||||||| |||||||| ||||| ||| ||||| Sbjct 45124680 GCAAACATGCTTTGATCATCTATGATGACTTATCCAAACA 45124719 Score = 93.3 bits (102), Expect = 1e-13 Identities = 97/126 (77%), Gaps = 5/126 (4%) Strand=Plus/Minus Query 4453 TTAATCAAAAATATTGTGAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATA 4512 ||||||| ||| || |||| || |||||||| || || || |||||||| || || Sbjct 45125073 TTAATCATAAA-AT----AATACCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATG 45125019 Query 4513 TAAGCAGAAACATCACCTGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCA 4572 |||||||| |||||||| ||||| ||||| | || ||||| || || | || |||||| Sbjct 45125018 TAAGCAGACACATCACCAGCTTGCGTTTCTATGACTGGTAAAGCAGTCAAGGAACCACCA 45124959 Query 4573 CCAAAA 4578 |||||| Sbjct 45124958 CCAAAA 45124953 >seq3268 Length=16727 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| || || |||||||||| |||||||| |||||||| || ||||| || | Sbjct 6074 TTCAGGATGTCCGAAGAATCAGAATAGGTGTTGATATAGGATAGGGTCTCCTCCTCCAGC 6015 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||||||||||| | ||||||| ||| | || ||||||| Sbjct 6014 GGGATCAAAAAATGTTGTATTAAGATTCCGGTCTGTTAAAA 5974 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || || || | || || ||||| || || || || ||||| | || ||| Sbjct 5502 CAAATTTATAATGTCATCGTAACCGCCCATGCTTTCGTAATAATCTTCTTCATAGTCATG 5561 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || | || || || || || ||||| ||| | || || ||||| ||||||||||| || Sbjct 5562 CCCATCATAATTGGGGGCTTTGGAAACTGACTAGTGCCGTTAATAATTGGTGCTCCGGAC 5621 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 ||||| || || | | || || || || || ||| | || || || ||||| ||||| Sbjct 5622 ATGGCATTCCCCCGAATAAATAACATGAGCTTCTGACTCCTTCCTCCATCCTTTCTTCTA 5681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192481267227992