Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq39 154 2e-32
seq21 127 3e-24
seq13 114 2e-20
>seq39
Length=123869142
Score = 154 bits (170), Expect = 2e-32
Identities = 271/391 (69%), Gaps = 3/391 (1%)
Strand=Plus/Minus
Query 46821 CCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttttt 46880
|| ||| || || ||||||| ||||| |||||| || || ||||| |||||||| | |
Sbjct 94450234 CCGATCTGCTTTCTTCTTTATACAAGACATTGTCTCAATGGCATTGAAGAGAAATTCCCT 94450175
Query 46881 ttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTT 46940
||| | | |||||||| | | || | || | || |||||||| || || | |||||
Sbjct 94450174 TTCTTTAGAATCTTTAATAAAAGTGACAATGAGGAGGCTATACATCTCAGAGTTGATGTT 94450115
Query 46941 TTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACA 47000
||| | | || || ||||| || ||||| ||||| ||||||| || |||
Sbjct 94450114 TTCCACGACAATTTGGAATCCATAGAAACAGAGGGCTTCTATAATCTGAACTTCTTGGAT 94450055
Query 47001 AAATCGTTCAGACAAATTCTCATTC-ACTATTCCATCACTAGCAGCAAAAAATGCCAATA 47059
||| | || ||| || || || ||||| |||||||| || |||| || ||||| |
Sbjct 94450054 AAACCACTCCACCAAGTTATCCTTTTACTATGCCATCACTTGCCACAAAGAAAGCCAAAA 94449995
Query 47060 CATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCC-AGTCATTGATATCTTTT 47118
||| ||||||||| | || || | || | ||||| | | | || || ||
Sbjct 94449994 TATGGGGTATAAAATATCTCTCCTCAGGTTTC-GAGGATTCCCAATGCTGAATGTCCTTG 94449936
Query 47119 GATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCAT 47178
|| | ||| || |||||||||||||| || || ||||| ||||| |||||||| | |||
Sbjct 94449935 GAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAA 94449876
Query 47179 ATATCACGATATTGGATCGGAAAAATAACAA 47209
||| || | || | ||| | | ||| ||||
Sbjct 94449875 ATACCATGGTACTCGATAAGGAGAATGACAA 94449845
>seq21
Length=50858623
Score = 127 bits (140), Expect = 3e-24
Identities = 108/133 (81%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||| || || ||||||||||| || || || |||||||| ||||| | ||
Sbjct 26626585 TGAAATTCTCCTGATAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 26626526
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||| ||||||| ||| ||||||||||||||||| ||||| || || | | ||||||
Sbjct 26626525 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 26626466
Query 75842 TTTCTGAGACCAT 75854
||||| | |||||
Sbjct 26626465 TTTCTTACACCAT 26626453
Score = 114 bits (126), Expect = 2e-20
Identities = 108/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || |||||||||| || ||||| ||||| || ||||| || |||||||| || |||
Sbjct 26610076 GTACCAGCATTAAACAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 26610017
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
|||||||||||| | || || ||||| || ||||| || |||| || | |||||||
Sbjct 26610016 TATGTTTCAATAGCAGCATCAATATCTTCTTCGTGAATCCCCACAGACACTCTCATCAAC 26609957
Query 77114 ATATGCTGAGGTCGTTCT 77131
||||| || |||| ||||
Sbjct 26609956 ATATGTTGTGGTCTTTCT 26609939
Score = 105 bits (116), Expect = 1e-17
Identities = 123/166 (74%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398
|| || | ||| |||||||| ||||| | || || ||||| || || || || || ||
Sbjct 26604883 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACGGCAATCCTTGCTGCCAGGATG 26604824
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
|||||||||||||| | || || |||| || ||| | || || || |||||||| | |
Sbjct 26604823 GCATAGTCAGGATGCTTAGTCGTCAAGGTTGCAGCTGTCTCAGCAGCCAAAGTATCCAGT 26604764
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
|| | |||||| || || | |||| ||||| || ||||||||||
Sbjct 26604763 TCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 26604718
Score = 104 bits (114), Expect = 3e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009
|| || | ||| ||||| || | ||| | || | || || || || || ||||| ||
Sbjct 26621657 GAACCTTCATAGGTTTCATATGGCCCATGCTCCTTGGCCAGGTCACAGCTGGCCTCCAAG 26621598
Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069
|| || |||||||| ||||| || || | |||||| || || ||||| |||| |||
Sbjct 26621597 GCTCCATAATAAATGGTTTCAAAGATTTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCA 26621538
Query 76070 AAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGT 76129
|||||||| | |||||||| |||||||| || || || || ||||| ||||| ||
Sbjct 26621537 AAAGGATACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGG 26621478
Query 76130 CTATGTCTCTTATTGGA 76146
| ||| | ||||| ||
Sbjct 26621477 CGATGGCGTTTATTTGA 26621461
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 76510 ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACA 76569
||||| | ||||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct 26617189 ATATAGCTTTTCAAATTCCTCTCCCCAAACCTCATCCAATCCAGGACATTCATTTGGACA 26617130
Query 76570 CATCAATGACCACTC 76584
|||||| ||||| ||
Sbjct 26617129 CATCAAAGACCAGTC 26617115
>seq13
Length=63241923
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
|||||||||| || || | ||| || ||||| ||||| |||||||| || || | || |
Sbjct 3818023 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATGAGACCTCTTTTCT 3818082
Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771
| ||||| |||||||| || ||||||||||| ||||| || ||||||||||| || || |
Sbjct 3818083 TTAGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 3818142
Query 46772 CGACAAGTCTCTCTCC 46787
| || | ||| || ||
Sbjct 3818143 CCACGACTCTTTCCCC 3818158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712905276629760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |