Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=88276631 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || |||| |||||||| || ||| | || || ||||| Sbjct 70238743 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGT 70238802 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCA 111218 || | ||| | || ||| ||||| ||||| || ||| | |||| | || || Sbjct 70238803 GACACCATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 70238861 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || | || |||| |||||||||||| | |||||| |||| || | || || || Sbjct 70238862 GCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCCGAACTCTGTCAGACTACAA 70238921 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 ||| || ||||| || || | || || ||| | || ||||| ||||||| Sbjct 70238922 TATCCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGCA 70238971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421794399787168