Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11- 02] 3,268 sequences; 2,410,976,875 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq17 93.3 4e-14 seq37 84.2 2e-11 seq8 82.4 8e-11 >seq17 Length=64289059 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || ||||| | |||||| ||||| || | || ||||| | || ||||| || Sbjct 7110692 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCCCGTTTCTTG 7110633 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| ||||||| ||||| || || |||||||| || || || || || ||||||||| Sbjct 7110632 AGCCAGAATATTGACGCAAAAGAACCCGAAAAGAAGATTCCTTCCACGGCAGCAAAGGCC 7110573 Query 23653 ACAA 23656 |||| Sbjct 7110572 ACAA 7110569 >seq37 Length=30902991 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446 || ||||||| || |||| ||| |||||| || ||||||||||||||||| ||||| Sbjct 28667677 GCGCACTGCAGCCCAGAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTA 28667618 Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTA 8482 ||||||| ||||||| |||||| |||| |||| Sbjct 28667617 GCTGGGACTACAGGCGCGCGCCACCGCGCCCGGCTA 28667582 >seq8 Length=74330416 Score = 82.4 bits (90), Expect = 8e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446 || ||||||| || |||| ||| |||||| || ||||||||||||||||| ||||| Sbjct 26223805 GCGCACTGCAGCCCAGAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTA 26223746 Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCC 8476 ||||||| ||||||| |||||| |||| Sbjct 26223745 GCTGGGACTACAGGCGCGCGCCACCGCGCC 26223716 Score = 82.4 bits (90), Expect = 8e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446 || ||||||| || |||| ||| |||||| || ||||||||||||||||| ||||| Sbjct 26423127 GCGCACTGCAGCCCAGAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTA 26423186 Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCC 8476 ||||||| ||||||| |||||| |||| Sbjct 26423187 GCTGGGACTACAGGCGCGCGCCACCGCGCC 26423216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521466697215200