Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq7 161 1e-34
seq9 116 5e-21
>seq7
Length=80974532
Score = 161 bits (178), Expect = 1e-34
Identities = 208/287 (72%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 8300 AACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATC 8359
|| ||||| ||||| ||||| | |||| |||||||| || | || | |||| |||
Sbjct 19669833 AATGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGGATTGAGGCAGTGTTGATGATT 19669892
Query 8360 CCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACG 8419
|| || || ||||| || |||||||| ||||||||||| | || || ||||||
Sbjct 19669893 TTAAAGCCTACTTCTCCACCAAAGGTGCTAGGCTTCCAGTAGTCAGGTGAACAGATGGGA 19669952
Query 8420 TTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAG 8479
|| |||| || ||||| | |||||| || || |||| || | ||| ||||||| |||
Sbjct 19669953 TTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTACCATGGTCTCACCAAAG 19670012
Query 8480 ATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACG 8539
||||| | ||||| |||||||| ||||||| | | |||||||||| || || |
Sbjct 19670013 ATGGCATCTGGACGAGGCTTTTCTACCAAGAGGGCAGGATACAGCTCCATGGCATCAATA 19670072
Query 8540 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
|| || ||||||||| | | ||||| || ||||| ||||||||
Sbjct 19670073 TCACCATAAAGGGCCTCCAACCCCGCAGCCATTTCCTTCTCTCCTGT 19670119
Score = 127 bits (140), Expect = 3e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 9648 TTCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAA 9707
||||||||||||| |||| |||||| ||||| || || |||||| ||| ||| | |
Sbjct 19672337 TTCTTACCCCATGGCCCAATCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGA 19672396
Query 9708 AAAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGAT 9767
|||| || || || || || ||| |||| || |||||||| | |||||||| |||||||
Sbjct 19672397 AAAATTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTGGTGCCTTGGGGAT 19672456
Query 9768 CGGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCT 9827
| ||| |||| | || || |||||| |||||||||| | | | ||| || ||||
Sbjct 19672457 CAGGAATGAACTTTCTTCGCAGAAGAAACTTTTCCACAATCTCTTTTGAATCAGGAAGCT 19672516
Query 9828 TTGTTTTACCTGGTGAACGAGAA 9850
| | || |||| ||| |||||
Sbjct 19672517 CTTTCTTGCCTGAAGAATGAGAA 19672539
>seq9
Length=61074082
Score = 116 bits (128), Expect = 5e-21
Identities = 168/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
||||||| || ||| |||| || || ||||| ||||| |||||||||||| | || |
Sbjct 60196007 TCTTGACCATATTGAAGCCCATCTCACCACCGAATGTGCTCGGCTTCCAGTACTCTGGAG 60196066
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
| |||||| ||| | | |||||| || |||||||| |||||||| | || | || |
Sbjct 60196067 AACAGATGGGATTCCCTAGGAGGCCCTTAAGGGAGAAGGGAGCCCCAATTTCTATCATAC 60196126
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528
|||| || ||||||| || ||| || ||| |||| | | || | ||| | ||||
Sbjct 60196127 TCTCTCCAAAGATGGAATTTGGATGGCACTTCTCCAGAAGCAGCCCCGGGTAGAATTCCA 60196186
Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585
|| || | |||||| || || || | ||||| || |||||||| || ||||
Sbjct 60196187 AGGCATCAATGTCTCCATACAGCTCCTCCAACTCGGCTGCCATCTCCTTCTCCCCTG 60196243
Score = 91.5 bits (100), Expect = 2e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294
|| || | ||||||||| | |||||||| |||||||| |||| ||| || || ||
Sbjct 60203548 CCAATGAGGATGAGTCGGGCCGTCTGGAAGAGTTGCTCATCACCCCAAGTGGGGTGCTCA 60203607
Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354
||||| | || ||||| | ||||| || | ||||||| ||||| || | ||||
Sbjct 60203608 GCCTTCAGCAGGTCACACACACGATTGTGCTCACGCAGCCAGAGCGTGGCATAGAGCATG 60203667
Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCA 9394
|||||||| | ||| ||||| |||| || || || ||||
Sbjct 60203668 AGCCCAGGAAGCAGCCCAAACACCTCCTGGCCCACGGCCA 60203707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716847515582720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |