Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Canis_20lupus_20familiaris_20[refseq_20GCF_5F000002285.3_202011-11-
02] 3,268 sequences; 2,410,976,875 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq26 149 6e-31
seq4 127 2e-24
seq1 118 1e-21
seq5 98.7 9e-16
>seq26
Length=38964690
Score = 149 bits (164), Expect = 6e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| |||||||| ||||||||| | || ||
Sbjct 5007792 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007733
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||||||| || |||| | ||| ||||| | ||| | || |||||||||| |
Sbjct 5007732 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007673
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || |||
Sbjct 5007672 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5007613
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| ||||| ||||| |||||||||
Sbjct 5007612 CCCGTCAAGGTCTTCACGAAGATCTGCATG 5007583
Score = 149 bits (164), Expect = 6e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| |||||||| ||||||||| | || ||
Sbjct 5008020 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007961
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||||||| || |||| | ||| ||||| | ||| | || |||||||||| |
Sbjct 5007960 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007901
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || |||
Sbjct 5007900 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5007841
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| ||||| ||||| |||||||||
Sbjct 5007840 CCCGTCAAGGTCTTCACGAAGATCTGCATG 5007811
Score = 149 bits (164), Expect = 6e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| |||||||| ||||||||| | || ||
Sbjct 5008248 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5008189
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||||||| || |||| | ||| ||||| | ||| | || |||||||||| |
Sbjct 5008188 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5008129
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || |||
Sbjct 5008128 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5008069
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| ||||| ||||| |||||||||
Sbjct 5008068 CCCGTCAAGGTCTTCACGAAGATCTGCATG 5008039
Score = 147 bits (162), Expect = 2e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| |||||||| ||||||||| | || ||
Sbjct 5007564 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007505
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||||||| || |||| | ||| ||||| | ||| | || |||||||||| |
Sbjct 5007504 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007445
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || |||
Sbjct 5007444 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5007385
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| ||||| ||||| ||||||||
Sbjct 5007384 CCCGTCAAGGTCTTCACGAAGATCTGCAT 5007356
Score = 143 bits (158), Expect = 2e-29
Identities = 160/211 (76%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| ||||| || ||||||||| ||||| |||||||| ||||||||| | || ||
Sbjct 5008476 ACCAAGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5008417
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||||||| || |||| | ||| ||||| | ||| | || |||||||||| |
Sbjct 5008416 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5008357
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || ||| |||| | | ||||| || | ||||||||||| || || || ||
Sbjct 5008356 ATCTTCGCCTT-AACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 5008298
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||||| ||||| ||||| |||||||||
Sbjct 5008297 ACCCGTCAAGGTCTTCACGAAGATCTGCATG 5008267
>seq4
Length=88276631
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| ||||| || ||||||| | | || ||
Sbjct 13711210 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATCTTCC 13711151
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||| ||| || |||| | ||| ||||| | ||| | || ||||||||| |
Sbjct 13711150 AGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGG 13711091
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| ||| ||| | | | ||||| | | ||||||||||| || || || |||
Sbjct 13711090 ATCTTTGCCTTGACATTCTCGATGGTGTCATTGGGCTCCACCTCCAGAGTGATGGTCTTA 13711031
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| |||| ||||| ||||| |||||||||
Sbjct 13711030 CCAGTCAAGGTCTTCACGAAGATCTGCATG 13711001
Score = 104 bits (114), Expect = 2e-17
Identities = 149/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| ||||| ||| |||||||| ||||| ||||||| ||||||||| | || ||
Sbjct 13711438 ACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGCAGGGTGCGCCCATCTTCC 13711379
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||||||| || |||| | ||| ||||| | |||| || ||| || || |
Sbjct 13711378 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAT-GCCCTCTTTTTCTTGG 13711320
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || || | | | ||||| || | ||||||||||| || || || |||
Sbjct 13711319 ATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTA 13711260
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||| ||||| || || ||||||||
Sbjct 13711259 CCAGTCAAGGTCTTCACAAAGATCTGCAT 13711231
>seq1
Length=122678785
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| ||||| ||| ||||||||| ||||| |||||||| ||||||| | | || ||
Sbjct 14875189 ACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCACCCATCTTCT 14875248
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| |||||||| || |||| | ||| ||||| | ||| | || ||| || || |
Sbjct 14875249 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGG 14875308
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || || | | | ||||| || | ||||||||||| || || || |||
Sbjct 14875309 ATCTTCCCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 14875368
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| |||| ||||| ||||| |||||||||
Sbjct 14875369 CCAGTCAAGGTCTTCACGAAGATCTGCATG 14875398
>seq5
Length=88915250
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| || || || ||| ||||| ||||| || || || || ||||| | || ||
Sbjct 39533556 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 39533615
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || || || || | ||| ||||| | || | || ||| || ||| |
Sbjct 39533616 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGG 39533675
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||||| | ||||| || | ||||||||||| || || || ||
Sbjct 39533676 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 39533735
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| ||||| ||||| ||||| ||||||||
Sbjct 39533736 CCGGTCAGGGTCTTCACGAAGATCTGCAT 39533764
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| || || || ||| ||||| ||||| || || || || ||||| | || ||
Sbjct 39533784 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 39533843
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || || || || | ||| ||||| | || | || ||| || ||| |
Sbjct 39533844 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGG 39533903
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||||| | ||||| || | ||||||||||| || || || ||
Sbjct 39533904 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 39533963
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| ||||| ||||| ||||| ||||||||
Sbjct 39533964 CCGGTCAGGGTCTTCACGAAGATCTGCAT 39533992
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734
||||| ||||| || || || || ||||| | || || ||||||||||| || || ||
Sbjct 47887995 TTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATG 47887936
Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794
|| | ||| ||||| | ||| | || ||| || ||| ||| || |||| ||| |
Sbjct 47887935 AGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC-ACGTTTTC 47887877
Query 41795 -ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853
| ||||| || | ||||||||||| || || || || || ||||| || || |||||
Sbjct 47887876 GATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAA 47887817
Query 41854 AATCTGCATGTT 41865
|||||||| ||
Sbjct 47887816 GATCTGCATTTT 47887805
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| || || || ||| ||||| ||||| || || || || ||||| | || ||
Sbjct 39534012 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 39534071
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || || || || | ||| ||||| | || | || ||| || ||| |
Sbjct 39534072 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCCTCTTTATCCTGG 39534131
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||||| | ||||| || | ||||||||||| || || || ||
Sbjct 39534132 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 39534191
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || ||||| ||| ||||
Sbjct 39534192 CCGGTTAGGGTTTTCACGAAGATCGGCAT 39534220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462285114881600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |