Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 6e-13 >seq11 Length=102031526 Score = 89.7 bits (98), Expect = 6e-13 Identities = 77/93 (83%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502 ||||||||||||||||||||||| ||| || || |||||||| ||||||||||||||| Sbjct 79380142 AATCCATTTGACTTTATGGAAAATATTTCACTGGAGGGGAAGACTAACTTCTTTGAGAAG 79380083 Query 65503 CGAGTTGGGGACTATGGGA-AATTGGA-TGATG 65533 |||| || || ||| || ||| ||| ||||| Sbjct 79380082 AGAGTAGGCGAGTATCAGAGAATGGGAGTGATG 79380050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595902202674240