Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 8e-13 >seq11 Length=102031526 Score = 89.7 bits (98), Expect = 8e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470 |||||||||||||||| || |||||||| || | | | ||||||||||||||||||| Sbjct 79383325 TTTCTTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGT 79383384 Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGG 18512 ||||||| || || || || | ||| || | | |||||||| Sbjct 79383385 TTTCCATGGCAATTTGGAAGCCATAGAAACAACGAGCCTCGG 79383426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731053236496800