Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capra_20aegagrus_20[genbank_20GCA_5F000978405.1_202015-04-24] 89,498 sequences; 2,828,873,048 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq23 125 9e-23 seq3 125 9e-23 seq69186 104 3e-16 seq22 96.9 4e-14 seq11 93.3 5e-13 seq1 89.7 6e-12 seq20 87.8 2e-11 >seq23 Length=51751091 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 30503136 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 30503077 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| |||||| ||||||| |||| | Sbjct 30503076 TGGTCGAGCGCTTGTTGTAGTGCGCCAGACGCGATGCCTCGCCCGCGATGCGCTCGAAGA 30503017 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 30503016 TATCGTTCACGAAGGAGTTCATGATACCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 30502957 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 30502956 GGACCTGCTTCAGCACTTTGTA 30502935 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 30512927 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 30512868 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 30512867 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGATGCCTCGCCCGCGATGCGCTCGAAAA 30512808 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 30512807 TGTCGTTTACAAAGGAGTTCATGATACCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 30512748 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 30512747 GGACTTGCTTCAGCACCTTGTA 30512726 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||| || || ||||||||||| | | || Sbjct 30862255 GCTTGGCCAGCTCCCCGGGTAGCAGCAGGCGTACCGCTGTCTGGATCTCCCTGGATGTGA 30862314 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 30862315 TAGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGA 30862374 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 30862375 TGTCGTTGACAAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 30862434 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 30862435 GGACCTGCTTCAGCACCTTGTA 30862456 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||||||||||||||||| | | || Sbjct 30875036 GCTTGGCCAGCTCCCCAGGCAACAGAAGGCGCACGGCGGTCTGGATCTCCCTGGATGTGA 30875095 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||||||| |||||| ||||||| || | | Sbjct 30875096 TGGTCGAGCGCTTGTTATAATGCGCCAGACGCGATGCCTCGCCTGCGATGCGCTCAAATA 30875155 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || || |||||||||| ||| | |||| |||||| || ||| |||| Sbjct 30875156 TATCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATTCCAGTGTCCGGGT 30875215 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 30875216 GGACCTGCTTCAGCACCTTGTA 30875237 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||| ||||||||||||||||| | | || Sbjct 30939147 GCTTGGCCAGCTCCCCGGGCAACAGCAGGCGAACGGCGGTCTGGATCTCCCTGGATGTGA 30939206 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 30939207 TGGTTGAACGCTTGTTGTAATGGGCCAGGCGCGATGCCTCGCCAGCGATGCGCTCGAAAA 30939266 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || || || ||||| ||||||| ||| | |||| ||||||||| |||||||| Sbjct 30939267 TATCATTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 30939326 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 30939327 GGACCTGCTTCAGCACCTTGTA 30939348 Score = 116 bits (128), Expect = 5e-20 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||||||| ||| | | | ||||||||| || ||||||||||| | | ||| || Sbjct 30131993 GCCAGTTCTCCGGGAAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGATGTGATGGTC 30131934 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | || ||||| || |||||| ||||||| |||| || ||| Sbjct 30131933 GAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAATATCG 30131874 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || || ||||| ||||||| ||| | |||| |||||||| ||||||||| ||| Sbjct 30131873 TTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACC 30131814 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 30131813 TGCTTCAGCACCTTGTA 30131797 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | ||||||||||| ||||||||||| | | || Sbjct 30140363 GCTTGGCCAGCTCTCCGGGAAGCAGGAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 30140422 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 30140423 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 30140482 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || || ||||||| ||| | |||| |||||||| |||||||| Sbjct 30140483 TGTCGTTCACGAATGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 30140542 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 30140543 GGACCTGCTTCAGCACCTTGTA 30140564 Score = 116 bits (128), Expect = 5e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| || ||| ||| | ||||| ||||| ||||||||||| | | ||| | Sbjct 30956071 TGGCCAACTCCCCGGGCAACAGTAGGCGTACGGCCGTCTGGATCTCCCTGGATGTGATAG 30956130 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | ||||||||||| ||||| ||||||| || | |||| Sbjct 30956131 TCGAGCGCTTGTTGTAATGCGCCAGACGCGACGCCTCACCCGCGATGCGCTCAAAGATGT 30956190 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 30956191 CGTTGACAAATGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 30956250 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 30956251 CCTGCTTCAGCACCTTGTA 30956269 Score = 113 bits (124), Expect = 5e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | ||||||||| || ||||||||||| | | || Sbjct 30115825 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGATGTGA 30115884 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 30115885 TGGTCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 30115944 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| || ||||| ||||||| ||| | |||| |||||||| ||| |||| Sbjct 30115945 TATCGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 30116004 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 30116005 GGACCTGCTTCAGCACCTTGTA 30116026 Score = 107 bits (118), Expect = 2e-17 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| || || ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 30990990 TGGCCAACTCCCCAGGCAACAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 30990931 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| | || || |||| |||| Sbjct 30990930 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCAATACGCTCGAAGATGT 30990871 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 30990870 CGTTGACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 30990811 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| || |||||||| Sbjct 30990810 CCTGCTTCAGTACCTTGTA 30990792 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | Sbjct 30923564 GCTTGGCCAGCTCCCCGGGCAGCAGTAGGCGCACGGCGGTCTGGATCTCCCTGGATGTAA 30923623 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| || | | Sbjct 30923624 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGAGACGCCTCGCCCGCGATGCGCTCAAAGA 30923683 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||| |||||||||| ||| | |||| ||||| || ||| || | Sbjct 30923684 TGTCATTGACAAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATACCGGTGTCCGGAT 30923743 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || || || ||||||||||| Sbjct 30923744 GGACTTGTTTCAGCACCTTGTA 30923765 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 31052005 GCTTGGCCAGCTCCCCGGGCAGCAACAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 31051946 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 31051945 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGTGACGCCTCGCCCGCGATGCGCTCGAAAA 31051886 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||||||| ||| | ||| || || || || || | Sbjct 31051885 TGTCGTTCACAAAGGAGTTCATGATACCCATGGCCTTAGATGAAATACCAGTATCTGGAT 31051826 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 31051825 GGACCTGCTTCAGAACCTTGTA 31051804 Score = 98.7 bits (108), Expect = 1e-14 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||| || ||||||||||| | | | Sbjct 30917630 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACAGCAGTCTGGATCTCTCTGGATGTAA 30917571 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || |||| || ||||| ||||||| |||| | Sbjct 30917570 TAGTCGAGCGCTTGTTATAATGAGCCAAGCGCGATGCCTCACCAGCGATGCGCTCGAAAA 30917511 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| || | Sbjct 30917510 TGTCGTTGACGAAGGAGTTCATGATGCCCATAGCCTTGGATGAGATGCCGGTGTCCGGAT 30917451 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 30917450 GGACTTGCTTCAGCACCTTGTA 30917429 Score = 98.7 bits (108), Expect = 1e-14 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 31330809 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 31330750 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 31330749 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGATGCCTCGCCCGCGATGCGCTCGAAAA 31330690 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCC 1254511 ||||||| ||||| |||||||||| ||| | |||| |||||||| Sbjct 31330689 TGTCGTTTACAAAGGAGTTCATGATACCCATGGCCTTGGACGAGATGCC 31330641 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| || || || ||||| || | | || Sbjct 31329726 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGTACAGCCGTTTGGATTTCCCTGGACGTGA 31329667 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| || |||||| |||| || |||| | Sbjct 31329666 TAGTGGAGCGCTTGTTATAATGTGCCAGGCGCGACGCCTCGCCTGCGATACGCTCGAAAA 31329607 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||||| ||||||| ||| | ||| |||||||| || |||| Sbjct 31329606 TGTCACTGACAAACGAATTCATGATGCTCATGGCCTTTGAAGAGATGCCGGTATCTGGGT 31329547 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| ||||||||||||||| Sbjct 31329546 GAACTTGCTTCAGCACCTTGTAGATG 31329521 >seq3 Length=114358107 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 19643167 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 19643108 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||| || || ||| ||||||| |||| | Sbjct 19643107 TGGTTGAGCGCTTGTTGTAATGCGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 19643048 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| || || || ||| |||| Sbjct 19643047 TGTCGTTGACAAATGAGTTCATGATGCCCATGGCCTTGGACGAAATACCGGTGTCTGGGT 19642988 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| | ||||||||| Sbjct 19642987 GCACCTGCTTCAACACCTTGTA 19642966 Score = 113 bits (124), Expect = 5e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | ||||||||| || ||||||||||| || | | Sbjct 19711818 GCTTGGCCAGCTCACCGGGAAGCAGCAGGCGCACCGCCGTCTGGATCTCTCGAGAAGTAA 19711759 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||||||| || ||| | | ||||| |||| | Sbjct 19711758 TGGTTGAGCGCTTGTTGTAATGCGCCAGACGCGACGCTTCGCCGGCAATGCGCTCGAAGA 19711699 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || || ||||||| ||| | |||| |||||||| ||| |||| Sbjct 19711698 TGTCATTGACGAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 19711639 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| || |||||||| || Sbjct 19711638 GCACCTGTTTCAGCACCTTATA 19711617 >seq69186 Length=418 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | Sbjct 182 GCTTGGCCAGCTCCCCGGGCAGCAGTAGGCGCACGGCGGTCTGGATCTCCCTGGATGTAA 241 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| || | | Sbjct 242 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGAGACGCCTCGCCCGCGATGCGCTCAAAGA 301 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||| |||||||||| ||| | |||| ||||| || ||| || | Sbjct 302 TGTCATTGACAAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATACCGGTGTCCGGAT 361 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || || || ||||||||||| Sbjct 362 GGACTTGTTTCAGCACCTTGTA 383 >seq22 Length=61117494 Score = 96.9 bits (106), Expect = 4e-14 Identities = 311/476 (65%), Gaps = 14/476 (3%) Strand=Plus/Minus Query 1852161 CAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCT 1852220 |||||| || ||||| | ||| || || ||||||||||| || || | | | | Sbjct 41841883 CAAAGGTGAAAATCTTTCTCTGATCAACACCTCCAAACTGGGCATCCACTTTCAAATATT 41841824 Query 1852221 GCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCA 1852280 || || | |||||||| | |||| |||| | ||||| || |||| | |||| Sbjct 41841823 CTTCATCCAAGGCCTGCAGCCCCAGGTACAGCAAGCCACTCAGCAGAGGGT---GCTCCA 41841767 Query 1852281 T---CTTGACCACCTGAGCGGCGGCCTTTTGCGC--CGTGCCG-GTGCGCACGTGCGCCG 1852334 ||| |||||| ||| | || || | || | ||| | ||| |||| | | Sbjct 41841766 CTTGCTTTGCCACCTCAGCTCCAGCTTTCTTGGCATCATGCTGTGTGACCACG---GAAG 41841710 Query 1852335 CGAGTCGGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAA 1852394 ||| ||||||| || |||| ||| | || | |||||| || ||||| | | Sbjct 41841709 AGAGGCGGTAGACATCCAGCGTGTACTCTTTGCTGAGCTGGTAATCAGTGCCTTTGATGA 41841650 Query 1852395 ACTCGAG-TCCGCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCG 1852453 ||| ||| | | || || ||||| || ||| || ||||| |||||||| || ||| Sbjct 41841649 ACTTGAGCTTCTCCAAG-GGCACCCCAATGCTCTCCAGCATTGCCTTGATCACATTCTCA 41841591 Query 1852454 TACCAGCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCG 1852513 || ||| | || |||| | || |||||||| | ||| ||| || |||| ||| Sbjct 41841590 TAATAGCTGGTTCGAAGTTCTAGAAGTTCCCACGGAGCCTTCATGTTATCCAGGTATGCG 41841531 Query 1852514 TGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTG 1852573 |||| ||| ||||| || || | ||| ||| || || | || ||||| | | || Sbjct 41841530 TGCAGGTCCGCAAACAGAATTGTTACCTCACATCCTGCTTTCAGGAAGTCTGTGATCTTA 41841471 Query 1852574 AAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATA 1852629 | |||||||||||||| | | || || ||||| || | || || ||||| || Sbjct 41841470 GACATGGGCACAAAGTAAGCCACATGTGGCTTGCCTGTAGTTGCTGTCCCCCAGTA 41841415 >seq11 Length=102031526 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| ||| || Sbjct 6634021 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 6633962 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 6633961 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 6633902 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 6633901 TTCAATATCAA 6633891 >seq1 Length=157394656 Score = 89.7 bits (98), Expect = 6e-12 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 1254423 TGCGCCAGACGGCCGGCCTCGG-TGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1254481 || ||||| | | || ||||| |||| | || || | || ||||| ||||||||||| Sbjct 22035329 TGGGCCAGCCAGGCGCCCTCGCCTGCC-AGCCGCTCAAACACATCGTTCACAAACGAGTT 22035387 Query 1254482 CATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1254541 ||||| ||| | |||| |||||||| | | ||||||||||||||| |||||||| Sbjct 22035388 CATGAAGCTCATGGCCTTGGAGGAGATGCTGATTT-GGGGTGCACCTGCTTCAGCACCTT 22035446 Query 1254542 GTAGATGAACGACGAGTA 1254559 ||||||| || |||||| Sbjct 22035447 GTAGATGTACATCGAGTA 22035464 >seq20 Length=69976673 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| || || Sbjct 57740811 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGACGTT 57740752 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || |||||||||||||| | || |||||||| || ||||| Sbjct 57740751 ACCTGCAAGACTGTTGCTAATATGATCAAGGGCAAAACTCCTGAGGAGATTCGAAAGACA 57740692 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 57740691 TTCAATATCAA 57740681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6099794575000866